Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05- 14] 425 sequences; 51,710,636 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq305 89.7 4e-13 >seq305 Length=264154 Score = 89.7 bits (98), Expect = 4e-13 Identities = 99/131 (76%), Gaps = 1/131 (1%) Strand=Plus/Plus Query 34524 CATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCG 34583 || |||||| |||||||||||||||||||| ||||| ||||| | ||||| || || Sbjct 38780 CAAGTTGACAATGACAGTCTTGATGCCGTTACCCTTGCCTTCAATCTTGGACTGGAGACG 38839 Query 34584 CGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGGTTAACGTTCACAGTCCCCAT 34643 | ||| |||||||||||||| | |||||| | | |||| | ||| || || |||| Sbjct 38840 CTCCATCTTGTAGCGGTAGAAGGGGTCCGCAATCTCGCGGCGGATGTTGACGGTAGCCAT 38899 Query 34644 CGTGGCTGGTG 34654 || || |||| Sbjct 38900 GGTTGC-GGTG 38909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412839461609525