Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05- 14] 425 sequences; 51,710,636 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq29 89.7 4e-12 >seq29 Length=72666 Score = 89.7 bits (98), Expect = 4e-12 Identities = 147/210 (70%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 282265 CAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT 282324 |||||| | |||||| ||| ||||| |||| ||| | || || |||||| | || || Sbjct 37775 CAAAAGGGACACATCAAAGGTACCACCGCCCAAGTCATAGATGAGGACATTCCTCTCCTT 37716 Query 282325 GTCTTGGTTT--TTATC-AAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 282381 || ||| | ||| ||||||||| || | ||||| || || || || || || || Sbjct 37715 CTCAGACTTTCCTGATCCAAGACCATATGCGATGGCAGCGGCGGTAGGCTCGTTGATGAT 37656 Query 282382 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 282441 | | ||| || || |||||||| || ||||| || ||||||||||| || || Sbjct 37655 ACGGAGAACGTTGAGGCCAGCAATGGCACCGGCATCCTTGGTGGCTTGTCTCTGGTTGTC 37596 Query 282442 GTTAAAATATGCAGGAACAGTAATAACGGC 282471 ||| || || || ||||| || || || || Sbjct 37595 GTTGAAGTAGGCTGGAACTGTGATGACAGC 37566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740609534296050