Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05-
14] 425 sequences; 51,710,636 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq29 89.7 4e-12
>seq29
Length=72666
Score = 89.7 bits (98), Expect = 4e-12
Identities = 147/210 (70%), Gaps = 3/210 (1%)
Strand=Plus/Minus
Query 282265 CAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTT 282324
|||||| | |||||| ||| ||||| |||| ||| | || || |||||| | || ||
Sbjct 37775 CAAAAGGGACACATCAAAGGTACCACCGCCCAAGTCATAGATGAGGACATTCCTCTCCTT 37716
Query 282325 GTCTTGGTTT--TTATC-AAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAAT 282381
|| ||| | ||| ||||||||| || | ||||| || || || || || || ||
Sbjct 37715 CTCAGACTTTCCTGATCCAAGACCATATGCGATGGCAGCGGCGGTAGGCTCGTTGATGAT 37656
Query 282382 TCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATC 282441
| | ||| || || |||||||| || ||||| || ||||||||||| || ||
Sbjct 37655 ACGGAGAACGTTGAGGCCAGCAATGGCACCGGCATCCTTGGTGGCTTGTCTCTGGTTGTC 37596
Query 282442 GTTAAAATATGCAGGAACAGTAATAACGGC 282471
||| || || || ||||| || || || ||
Sbjct 37595 GTTGAAGTAGGCTGGAACTGTGATGACAGC 37566
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740609534296050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |