Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05-
14] 425 sequences; 51,710,636 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq244 95.1 1e-14
seq9 82.4 7e-11
>seq244
Length=165466
Score = 95.1 bits (104), Expect = 1e-14
Identities = 291/444 (66%), Gaps = 27/444 (6%)
Strand=Plus/Minus
Query 50295 GCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCTTTGCAGCCATATTTTACATT 50354
|| |||||| ||||| ||| | || || |||| ||||||| |||| || | |
Sbjct 56445 GCCTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCATCCATCTTCTGGCTC 56386
Query 50355 AA-AACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGA 50413
|| || | | ||| | ||||| || ||||| || ||| ||| | || || || |||||
Sbjct 56385 AAGAAGCGT-GGCCTCATGCCAGGTCTCACCTTCTCCAATGAGCTCATCTCTCGTGACGA 56327
Query 50414 AGGAATGCACACAGACTTTGCGTGT------TTGTACTAC---AATACGCGCGTAAATGA 50464
|| |||||||| |||||||| || || | | || || ||||| || |
Sbjct 56326 GGGTATGCACACTGACTTTGCCTGCCTCCTCTTTTCCCACCTCAAGTCGCGCCCAA--GC 56269
Query 50465 AAAATTATCATACGAAACAATTTTGGACATGTTCAAAGAAGCCGTCGACATCGAAAAAGA 50524
|| || | ||| ||||| ||| || |||||| ||| || | ||
Sbjct 56268 AAG-----CAGGCTGTGCAA-----GACATCATCACTGAGGCCGTCACCATTGAGCAGGA 56219
Query 50525 GTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAGACATGATGTGCGA 50584
||| || | || |||| || ||| || | |||||||| || | | |||||| |
Sbjct 56218 GTTCTTGTCCGAGTCTTTGCCATGCGCACTGCTCGGCATGAATGCCACCCTCATGTGCCA 56159
Query 50585 GTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAGCTGGG--ACAACCGAAATACTAT 50642
|||||||||||||||||| ||| | || | || || || ||||| || | |||
Sbjct 56158 GTACATTGAGTTTGTTGCCGACCGTCTGCTCTTAGCCCTCGGCAACAAC--AAGTTCTAC 56101
Query 50643 AATGCACGTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGCAAAACAAACTTT 50702
|| || || |||||| |||||| | ||||| || ||| |||||| || |||||
Sbjct 56100 AACGCTACCAATCCCTTTGACTTTATGGAGAACATCTCCCTGGCGGGCAAGACCAACTTC 56041
Query 50703 TTCGAAAGACGTGTAGGCGAATAC 50726
||||| | ||||| || || |||
Sbjct 56040 TTCGAGAAGCGTGTTGGTGACTAC 56017
>seq9
Length=355999
Score = 82.4 bits (90), Expect = 7e-11
Identities = 141/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244
|| || || | ||| | || | ||||| || ||||| || || |||||||| ||| |
Sbjct 45176 CCACCGCGAAGACGGAGGACAAGATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 45235
Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304
| |||| || || ||||| |||||||| |||||| || || || || |||||
Sbjct 45236 AAGGTGCGGCCATCCTCCAGTTGCTTACCAGCGAAGATCAATCGCTGTTGGTCTGGAGGA 45295
Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364
||||| || ||||| ||||||| || | | || | || || | || ||| |||
Sbjct 45296 ATGCCCTCCTTGTCCTGAATTTTTGACTTCACATTGTCGATGGTATCAGAGGATTCGACT 45355
Query 137365 TCAACAGTCACCGTCTTGCCGGTCA 137389
|| | || | |||||||||||||
Sbjct 45356 TCGAGGGTGATGGTCTTGCCGGTCA 45380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 488541404610000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |