Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05-
14] 425 sequences; 51,710,636 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq164 150 4e-31
>seq164
Length=316633
Score = 150 bits (166), Expect = 4e-31
Identities = 446/681 (65%), Gaps = 9/681 (1%)
Strand=Plus/Minus
Query 110307 TTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATTGAA 110366
|| |||||||| || |||||||| | || | || | |||||||| || | ||||
Sbjct 150684 TTCGGTTTCAAGACCCTTGAACGATCATACCTGCTCAGAATCAATGGCAAGGTTGCTGAA 150625
Query 110367 CGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAAGCT 110426
||||||||||||||| || | ||||| || | || ||||| || | || ||| | |
Sbjct 150624 CGTCCTCAACACATGCTTATGCGTGTAGCTGTAGGCATTCACGGCGAAGACATTGAGTCC 150565
Query 110427 GTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCT--ATTCATGCTACTCCTACCC 110484
| || || ||| | || | || ||| || || | ||||| | || ||||
Sbjct 150564 GCGATCGAGACATATAAC-TAC-ATGTCAAACAAATACTTCACACATGCCTCGCCGACCC 150507
Query 110485 TATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAATTAACG 110544
| || |||||||| || | |||| || | |||||||| || | | || || |
Sbjct 150506 TCTTCAACGCAGGCACCCCGTCACCACAAATGTCCTCTTGCTTCCTCATCGACATCAAGG 150447
Query 110545 ATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAACT 110604
||||| ||||||||||| ||||| | || || ||| | ||||| || |
Sbjct 150446 ATGATAGCATTGAAGGTATCTATGACACCCTGAAGACTTGTGCCATGATTTCCAAGACTG 150387
Query 110605 CTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAACAG 110664
|||| || |||||| | | || ||| ||| ||| | | || | |||| | |
Sbjct 150386 CTGGCGGTATTGGTCTGAATGTGCATCGTATCCGCGCTACTGGCTCCTATATTGGCGGAA 150327
Query 110665 CGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAAT 110724
| || ||| | || | ||| || | || ||| | | |||| |||| |||||||| ||
Sbjct 150326 CCAATGGTACCTCCAATGGTCTCATCCCCATGCTCCGCGTCTACAACAACACTGCACGAT 150267
Query 110725 ATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGC 110781
| || |||| ||||| |||| | || | || || ||||||||||| || ||||
Sbjct 150266 ACGTCGATCAGGGTGGGAATAAGCGTCCGGGTGCCTTCGCCATCTATCTCGAGCCATGGC 150207
Query 110782 ATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAG 110841
| | || | || | ||| | || || | |||||||| || ||||| | |
Sbjct 150206 ACGCCGACGTTTTCGGCTTCCTTGATCTAAGGAAAAATCATGGTAAGGAAGAGGTCCGTG 150147
Query 110842 CACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAA 110901
| || || || || || ||| | ||||| | || || |||||||| ||||| ||||| |
Sbjct 150146 CTCGCGACTTGTTCTACGCACTATGGATCCCCGACTTGTTCATGAAGCGTGTCCAAGAGA 150087
Query 110902 ATGGCATGTGGTCTCTTATGTGTCCTCATCG-TTCTCCTGGTCTATCTGATGTATATGGA 110960
| ||| ||| |||| | || || || || ||||||| || | || || |||||
Sbjct 150086 ACGGCGAATGGACTCTGTTCTG-CCCCAACGAAGCTCCTGGCCTCGCCGACGTTTATGGT 150028
Query 110961 AAAGAGTTTGAAGACCTTTAC 110981
| |||||||| || || |||
Sbjct 150027 GATGAGTTTGAGGAACTCTAC 150007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186806337433425
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |