Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05- 14] 425 sequences; 51,710,636 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq9 120 2e-22 >seq9 Length=355999 Score = 120 bits (132), Expect = 2e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||||| || ||||| ||| ||||| |||||||| || || Sbjct 44947 ACCACCACGGAGACGCAGCACCAAGTGCAGAGTTGACTCCTTTTGGATGTTGTAGTCTGA 45006 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || || | || ||||||||||| ||||||||||||||||| |||| Sbjct 45007 CAGAGTTCGGCCATCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGATCCGGCGG 45066 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| |||||||| ||| || || || || | ||| | ||| || ||| || | Sbjct 45067 GATACCCTCTTTGTCCTGAATCTT-TGATTTTACGTTGTCGATGGTATCCGATGACTCGA 45125 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| ||||| || || || || | || || || ||||| |||||| Sbjct 45126 CCTCAAGAGTGATGGTCTTGCCAGTGAGTGTCTTGACGAAGATTTGCATA 45175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328702297416000