Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05-
14] 425 sequences; 51,710,636 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq164 178 2e-39
>seq164
Length=316633
Score = 178 bits (196), Expect = 2e-39
Identities = 506/763 (66%), Gaps = 16/763 (2%)
Strand=Plus/Plus
Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714
||||| || || |||||| | ||||| || || | | || || | ||||||||
Sbjct 150155 TCTTCCTTACCATGATTTTTCCTTAGATCAAGGAAGCCGAAAACGTCGGCGTGCCATGGC 150214
Query 69715 TCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCA 69774
|| ||||| || || | | | ||||| || ||||| || |||||||| | ||||| |||
Sbjct 150215 TCGAGATAGATGGCGAAGGCACCCGGACGCTTATTCCCACCCTGATCGACGTATCGTGCA 150274
Query 69775 GTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAA 69834
||||| || ||||| | ||||| || || | |||||| || ||||||| ||||| |
Sbjct 150275 GTGTTGTTGTAGACGCGGAGCATGGGGATGAGACCATTGGAGGTACCATTGGTTCCGCCA 150334
Query 69835 ATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTA 69894
||||| || | ||||| ||| | | | ||||| || || || || | ||
Sbjct 150335 ATATAGGAGCCAGTAGCGCGGATACGATGCACATTCAGACCAATACCGCCAGCAGTCTTG 150394
Query 69895 GAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATG 69954
|| || | |||||| |||| |||||||| ||||| || ||||||||||| | |||
Sbjct 150395 GAAATCATGGCACAAGTCTTCAGGGTGTCATAGATACCTTCAATGCTATCATCCTTGATG 150454
Query 69955 TTAAGAAGAAAACAGCTAGACATTTGATGATG-TATAGTTCCCGCATTAAATAATGTAGG 70013
| | || || || |||||||| || || || || || || || | || ||
Sbjct 150455 TCGATGAGGAAGCAAGAGGACATTTG-TGGTGACGGGGTGCCTGCGTTGAAGAGGGTCGG 150513
Query 70014 AGATGCGTGAGTGAACCATTTTTCAGA-AAGCAGATTGTATGTTTCAATAGCTGATTCTA 70072
|| || || ||||| |||| | || | | || || ||||| || || || || || |
Sbjct 150514 CGAGGCATGTGTGAAGTATTTGTTTGACATGTAG-TTATATGTCTCGATCGCGGACTCAA 150572
Query 70073 TATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACC 70131
| || | | | ||||| |||| || |||||||| | ||| || ||||| ||||| |
Sbjct 150573 TGTCTTCGCCG-TGAATGCCTACAGCTACACGCATAAGCATGTGTTGAGGACGTTCAGCA 150631
Query 70132 GTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGT-TTTAAACCCAA-AATAGT 70189
|| ||| ||| | | |||||||||| ||| || || || ||||| || || |
Sbjct 150632 ACCTTGCCATTGATTCTGAGCAGGTATGATCGTTCAAGGGTCTTGAAACCGAAGAACTGA 150691
Query 70190 TGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGGTAA 70249
| ||||| || | || || | || | || ||||| | ||| | ||| |
Sbjct 150692 TAGTTGAAA--TCACGGTCATACACGATGGCCGAGTTTAGATCATCTGCGTGTTTCTGCA 150749
Query 70250 CTATATCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTAACAT 70309
| |||||||| || || || || || || |||| || || || || ||||
Sbjct 150750 CAATATCCATGACTGTCTTAGATATCATAGGTTGGTGTTTGTGGTTCTTGGGGTTGACAT 150809
Query 70310 AGTTGAATAAATCTTCCATTACATCA--CTA-AATAGtttttttGTTTCCTTGTGTAAAT 70366
||||| | | | ||| |||| || | | ||| | || || || | ||||||| |
Sbjct 150810 AGTTGTAGAGA---TCCGATACAACAGCCGAGAATTGCTTCTTGGTCTGTTTGTGTAGGT 150866
Query 70367 TTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATG 70409
| || | ||| || | || || || |||||||||||||||||
Sbjct 150867 TCGAAACGGCAATACGTGCGGCGAGTATAGCATAGTCAGGATG 150909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686905150797000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |