Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05-
14] 425 sequences; 51,710,636 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq382 86.0 5e-12
>seq382
Length=167612
Score = 86.0 bits (94), Expect = 5e-12
Identities = 235/356 (66%), Gaps = 8/356 (2%)
Strand=Plus/Minus
Query 19441 AATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTG 19500
||||| || || | | || || || || ||||| ||||||||||| | || ||
Sbjct 127950 AATGGCCCGGAGGTGCTCAACAAGTACGTCGGTCAGTCGGAAGAAAACATTCGCAAAATG 127891
Query 19501 TTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG-CAAAAGTTCTTTGCACATTAT 19559
||||| ||||| || ||||| | || | |||| | | | ||| ||||||||||
Sbjct 127890 TTTGCAGACGCCGAGAAAGAA-TACAAGGAGAAGGGTGACGAGAGTGGACTGCACATTAT 127832
Query 19560 AATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAG---GTTCT---GGTGTAAATGG 19613
|| | || || |||||||| | || |||||| ||| || || |||| | |||
Sbjct 127831 TATCTTTGACGAGTTGGACGCTGTATGCAAGCAACGAGGCAGTACTGGCGGTGGGACTGG 127772
Query 19614 AGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCAACTGAA 19673
||| |||| || ||||| || || || || || | || |||||| | || || ||
Sbjct 127771 CGTAGGAGACAGCGTCGTCAACCAGCTTCTTTCCAAGCTTGATGGTGTTGATCAGCTAAA 127712
Query 19674 TAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATTACG 19733
|| ||| || | || || |||||||| || |||| | || || || || | ||
Sbjct 127711 CAACATTCTATTGATCGGTATGACTAACCGAATGGACATGATCGATGAGGCTCTACTCCG 127652
Query 19734 ACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGACGTG 19789
| | ||||| || ||| | | || || ||| | | || ||||| ||| ||||
Sbjct 127651 AGCAGGTCGTTTAGAAGTCCACATGGAGATTTCCCTCCCAGATGAGCATGGGCGTG 127596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397453941302125
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |