Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05- 14] 425 sequences; 51,710,636 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq244 86.0 2e-11 >seq244 Length=165466 Score = 86.0 bits (94), Expect = 2e-11 Identities = 117/162 (72%), Gaps = 1/162 (1%) Strand=Plus/Minus Query 443708 GCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCA 443767 ||| || |||| ||||| | || || || | || || ||||| |||| || |||| Sbjct 56455 GCGTCTTATCGCCTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTT-GCATCCA 56397 Query 443768 TCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCA 443827 |||||||| | || |||||||| || |||| ||||| ||||| || || || ||| Sbjct 56396 TCTTCTGGCTCAAGAAGCGTGGCCTCATGCCAGGTCTCACCTTCTCCAATGAGCTCATCT 56337 Query 443828 GTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 ||| ||||||||| |||| ||||| ||||| || |||| Sbjct 56336 CTCGTGACGAGGGTATGCACACTGACTTTGCCTGCCTCCTCT 56295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588327351014125