Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05-
14] 425 sequences; 51,710,636 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq164 156 5e-33
>seq164
Length=316633
Score = 156 bits (172), Expect = 5e-33
Identities = 354/521 (68%), Gaps = 10/521 (2%)
Strand=Plus/Minus
Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAA-TCACCCTCAGAT 53325
|| ||||| || || ||| |||| ||||| |||||||| || || ||||| || ||
Sbjct 150534 AAATACTTCACACATGCCTCGCCGACCCTCTTCAACGCAGGCACCCCGTCACCA-CAAAT 150476
Query 53326 GTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCT 53385
||| |||||||| | | || |||||||| || || || ||||| || || ||
Sbjct 150475 GTCCTCTTGCTTCCTCATCGACATCAAGGATGATAGCATTGAAGGTATCTATGACACCCT 150416
Query 53386 CAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGC-TCGAAC 53443
||| |||||| || |||||| | || ||||| ||| | | ||| ||| |
Sbjct 150415 GAAGACTTGTGCCATGATTTCCAAGACTGCTGGCGGTATTGGTCTGAATGTGCATCGTA- 150357
Query 53444 GTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCT 53503
|||| || | ||| | || || || || || | || |||| || | ||
Sbjct 150356 -TCCGCGCTACTGGCTCCTATATTGGCGGAACCAATGGTACCTCCAATGGTCTCATCCCC 150298
Query 53504 ATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAG 53563
||||||||||||| ||||||||| || || |||||| | |||||||| ||||| |
Sbjct 150297 ATGCTCCGCGTCTACAACAACACTGCACGATACGTCGATCAGGGTGGGAATAAGCGTCCG 150238
Query 53564 GGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTG 53623
|| | ||||||||||| |||||||| |||||||||||| || | | || || || ||
Sbjct 150237 GGTGCCTTCGCCATCTATCTCGAGCCATGGCACGCCGACGTTTTCGGCTTCCTTGATCTA 150178
Query 53624 CGTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT-TACAGCTCTGTGGA 53681
| ||||| ||| | |||||| | || ||| || ||| |||| ||| || || ||||
Sbjct 150177 AGGAAAAATCATGGTAAGGAAGAGGTCCG-TGCTCGCGACTTGTTCTAC-GCACTATGGA 150120
Query 53682 TTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGA 53741
| || ||| | |||||| | || | || ||| || ||| ||| | ||||| |
Sbjct 150119 TCCCCGACTTGTTCATGAAGCGTGTCCAAGAGAACGGCGAATGGACTCTGTTCTGCCCCA 150060
Query 53742 ACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTT 53782
|||| || |||||| | || || ||||| ||||||
Sbjct 150059 ACGAAGCTCCTGGCCTCGCCGACGTTTATGGTGATGAGTTT 150019
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547213092915000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |