Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05-
14] 425 sequences; 51,710,636 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq9 87.8 1e-12
>seq9
Length=355999
Score = 87.8 bits (96), Expect = 1e-12
Identities = 159/230 (69%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| || || || || || ||||| || || || |||| ||||| || |
Sbjct 45174 ATGCAAATCTTCGTCAAGACACTCACTGGCAAGACCATCACTCTTGAGGTCGAGT-CATC 45116
Query 27850 G---ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906
| || || |||| || ||| ||| || |||||||| ||| | ||| |||
Sbjct 45115 GGATACCATCGACAAC--GTAAAATCAAAGATTCAGGACAAAGAGGGTATCCCGCCGGAT 45058
Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966
||||| || || || ||||||||||| || | || || | || | |||| || |||
Sbjct 45057 CAGCAGCGTTTGATCTTTGCCGGAAAGCAGCTCGAGGATGGCCGAACTCTGTCAGACTAC 44998
Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||||||||| ||| ||| |||| ||||| ||||| | ||||| ||
Sbjct 44997 AACATCCAAAAGGAGTCAACTCTGCACTTGGTGCTGCGTCTCCGTGGTGG 44948
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355860556743975
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |