Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05-
14] 425 sequences; 51,710,636 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq196 89.7 4e-13
>seq196
Length=468221
Score = 89.7 bits (98), Expect = 4e-13
Identities = 152/219 (69%), Gaps = 1/219 (0%)
Strand=Plus/Plus
Query 29591 CTCCT-GTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAG 29649
||||| |||||| | ||| || || || | | || || | |||| || || ||||
Sbjct 28508 CTCCTTGTTTATACGCAGGGTAGGGAAATCTTTAGGTTCGCGGTCGATTTGGATTTTCAG 28567
Query 29650 CGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGG 29709
| || |||||||| ||||||||||| || || |||| |||||| || |||||
Sbjct 28568 GGCGTCGACGTGGTCGAGGTAGACGTGCGCGTCGCCCATTGTGTGGGTGAAGGTCCCCGG 28627
Query 29710 TTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAA 29769
|| || |||||| || | ||||| || || | || |||| ||||||||| ||
Sbjct 28628 CGTAAGATCGCAGACGTGGGCGAGCATGTGGGTTAGTAAAGCGTAGGAGGCGATGTTGAA 28687
Query 29770 GGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAG 29808
||| | ||||| |||||||| | || | ||||||||
Sbjct 28688 GGGGATGCCGAGGCCCATGTCGCAGGAGCGTTGGTAGAG 28726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406161096201550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |