Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nigrograna_20mackinnonii_20[genbank_20GCA_5F001007845.1_202015-05-
14] 425 sequences; 51,710,636 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq164 183 4e-41
>seq164
Length=316633
Score = 183 bits (202), Expect = 4e-41
Identities = 589/902 (65%), Gaps = 18/902 (2%)
Strand=Plus/Plus
Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984
||||| ||||| || |||| || | | ||||| ||| || ||||| | || | |
Sbjct 150017 TCAAACTCATCACCATAAACGTCGGCGAGGCCAGGAGCTTCGTTGGGGCAGAACAGAGTC 150076
Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044
|| || || | || | || || ||||| || | || || |||||||| || ||
Sbjct 150077 CATTCGCCGTTCTCTTGGACACGCTTCATGAACAAGTCGGGGATCCATAGTGCGTAGAAC 150136
Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104
| || || | | ||||| || || ||| || | ||||| || || | | |
Sbjct 150137 AAGTCGCGAGCACGGACCTCTTCCTTACCATGATTTTTCCTTAGATCAAGGAAGCCGAAA 150196
Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164
| || | |||||||| || ||||| || || | | || || || ||||| || |||
Sbjct 150197 ACGTCGGCGTGCCATGGCTCGAGATAGATGGCGAAGGCACCCGGACGCTTATTCCCACCC 150256
Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224
||||| | |||| || ||||| || || || | | ||| || || | ||| || ||
Sbjct 150257 TGATCGACGTATCGTGCAGTGTTGTTGTAGACGCGGAGCATGGGGATGAGACCATTGGAG 150316
Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTA--CTAATGGATATCC 78282
|| ||||| ||||| |||||| ||| | ||||| ||| | | || | | |
Sbjct 150317 GTACCATTGGTTCCGCCAATATAGGAGCCAGTAGCGCGGATACGATGCACATTCAGA--C 150374
Query 78283 CTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCT 78342
| || || || || |||| || || | || ||| |||| || || |||||||| |
Sbjct 150375 CAATACCGCCAGCAGTCTTGGAAATCATGGCACAAGTCTTCAGGGTGTCATAGATACCTT 150434
Query 78343 CTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTT- 78401
| || || |||||| | |||| | || || || |||||||| || ||| | |
Sbjct 150435 CAATGCTATCATCCTTGATGTCGATGAGGAAGCAAGAGGACATTTG-TGGTGACGGGGTG 150493
Query 78402 CCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAA-GTAGATTGTA 78460
||||| || || | ||||| || ||||| || || |||| | || | |||| || ||
Sbjct 150494 CCTGCGTTGAAGAGGGTCGGCGAGGCATGTGTGAAGTATTTGTTTGACATGTAG-TTATA 150552
Query 78461 TGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACAT 78520
||| || || || || || ||||| ||||| ||||| ||||||||||| | |||
Sbjct 150553 TGTCTCGATCGCGGACTCAATGTCTTCGCCGTGAATGCCTACAGCTACACGCATAAGCAT 150612
Query 78521 ATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGT 78580
|| ||||| | |||| | ||| ||| ||| | | || ||||||| ||| | ||
Sbjct 150613 GTGTTGAGGACGTTCAGCAACCTTGCCATTGATTCTGAGCAGGTATGATCGTTCAAGGGT 150672
Query 78581 TTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGT 78638
|| ||||| || | | || ||||| || | || || | || | || |||||
Sbjct 150673 CTTGAAACCGAAGAACTGATAGTTGAAA--TCACGGTCATACACGATGGCCGAGTTTAGA 150730
Query 78639 TTATCTTTGTATTTGGTAACAATATCCATGACAGTAGTTGAAATAATAGGAGATCGTACA 78698
| |||| || ||| |||||||||||||| || | || || ||||| ||
Sbjct 150731 TCATCTGCGTGTTTCTGCACAATATCCATGACTGTCTTAGATATCATAGGTTGGTGTTTG 150790
Query 78699 CCATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCA--CTA-AATAGtttt 78755
|| || || || |||||||| | | | ||| |||| || | | ||| | ||
Sbjct 150791 TGGTTCTTGGGGTTGACATAGTTGTAGAGA---TCCGATACAACAGCCGAGAATTGCTTC 150847
Query 78756 tttGTTTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGA 78815
|| || | |||||||| || || || || || | ||| || || |||||||| ||||||
Sbjct 150848 TTGGTCTGTTTGTGTAGGTTCGAAACGGCAATACGTGCGGCGAGTATAGCATAGTCAGGA 150907
Query 78816 TG 78817
||
Sbjct 150908 TG 150909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694665109572000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |