Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq6 127 4e-24
>seq6
Length=1499889
Score = 127 bits (140), Expect = 4e-24
Identities = 180/253 (71%), Gaps = 0/253 (0%)
Strand=Plus/Minus
Query 230385 AATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCG 230444
|||||| | ||||| || |||| ||| | || ||| | || ||| ||||||||
Sbjct 78120 AATCATCATTGAAGCCGTGGAAATCGAGCAAGAATTCTTAACGGATGCTCTTCCATGTGC 78061
Query 230445 CCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504
|| ||||||||||| | | | ||| | || |||||||| |||||||||||||| |
Sbjct 78060 TCTCCTTGGCATGAACTCCAAGTTGATGTGCCAATACATCGAGTTCGTAGCCGACCGGTT 78001
Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564
|||| || ||||| || ||||| || ||||| | |||||| || | || |||||
Sbjct 78000 ACTTGTAGCTCTTGGCAACAAGAAACATTATAACTCCACGAACCCATTCGACTTCATGGA 77941
Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624
||| |||||| || ||||||||||| || || |||||||| | || || || |
Sbjct 77940 TAACATCTCGCTTGCCGGCAAGACCAACTTTTTTGAGAAGCGTGTTGGCGATTACCAAAA 77881
Query 230625 GCCTGGTGTGATG 230637
||||||| |||
Sbjct 77880 AGCTGGTGTCATG 77868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823471418570
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |