Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq6 127 4e-24 >seq6 Length=1499889 Score = 127 bits (140), Expect = 4e-24 Identities = 180/253 (71%), Gaps = 0/253 (0%) Strand=Plus/Minus Query 230385 AATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCG 230444 |||||| | ||||| || |||| ||| | || ||| | || ||| |||||||| Sbjct 78120 AATCATCATTGAAGCCGTGGAAATCGAGCAAGAATTCTTAACGGATGCTCTTCCATGTGC 78061 Query 230445 CCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504 || ||||||||||| | | | ||| | || |||||||| |||||||||||||| | Sbjct 78060 TCTCCTTGGCATGAACTCCAAGTTGATGTGCCAATACATCGAGTTCGTAGCCGACCGGTT 78001 Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564 |||| || ||||| || ||||| || ||||| | |||||| || | || ||||| Sbjct 78000 ACTTGTAGCTCTTGGCAACAAGAAACATTATAACTCCACGAACCCATTCGACTTCATGGA 77941 Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624 ||| |||||| || ||||||||||| || || |||||||| | || || || | Sbjct 77940 TAACATCTCGCTTGCCGGCAAGACCAACTTTTTTGAGAAGCGTGTTGGCGATTACCAAAA 77881 Query 230625 GCCTGGTGTGATG 230637 ||||||| ||| Sbjct 77880 AGCTGGTGTCATG 77868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823471418570