Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq6 109 6e-19 >seq6 Length=1499889 Score = 109 bits (120), Expect = 6e-19 Identities = 284/427 (67%), Gaps = 12/427 (3%) Strand=Plus/Plus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 |||||||||||| ||| || || || |||||||| || ||||| | || || || || | Sbjct 77882 TTTGGTAATCGCCAACACGCTTCTCAAAAAAGTTGGTCTTGCCGGCAAGCGAGATGTTAT 77941 Query 16734 CCATGAAATCAAAAGGATTAGTAG-CTGAAAATATTTTAGAGTACCCCAGTTCGGCGATT 16792 ||||||| || || || || || | | | ||| ||| || || || | | | | Sbjct 77942 CCATGAAGTCGAATGGGTTCGTGGAGTTATAAT-GTTTCTTGTTGCCAAGAGCTACAAGT 78000 Query 16793 AATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA 16852 || | || ||||| || || || ||||||||||| || | | ||||||| || | ||| Sbjct 78001 AACCGGTCGGCTACGAACTCGATGTATTGGCACATCAACTTGGAGTTCATGCCAAGGAGA 78060 Query 16853 CGTAC-CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911 | || |||||||| ||||| || ||| |||||| || | || ||||| | || || Sbjct 78061 -GCACATGGAAGAGCATCCGTTAAGAATTCTTGCTCGATTTCCACGGCTTCAATGATGAT 78119 Query 16912 ACTAGCAACTCGTTC----CTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATG 16967 ||||| ||| || |||||||| | || || || | || || | Sbjct 78120 TGCTGCAACAGCTTCTGGGCTGGGACGGTGGCGG----AGGTGAGAGAAGAGGAGGCAAG 78175 Query 16968 CGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGG 17027 | || || || | |||||||| | ||| || ||||| || || || | || | Sbjct 78176 CAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTAAGGCCAG 78235 Query 17028 GCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATAC 17087 |||| || || ||||||||||| || || | || || || ||| ||||| |||| Sbjct 78236 GCATGAGACCACGCTTCTTTAACCAGAAAATAGAAGCAAAAGAACCACTGAAGAAGATAC 78295 Query 17088 CCTCGAC 17094 |||| || Sbjct 78296 CCTCAAC 78302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545347696520