Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq6 109 6e-19
>seq6
Length=1499889
Score = 109 bits (120), Expect = 6e-19
Identities = 284/427 (67%), Gaps = 12/427 (3%)
Strand=Plus/Plus
Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733
|||||||||||| ||| || || || |||||||| || ||||| | || || || || |
Sbjct 77882 TTTGGTAATCGCCAACACGCTTCTCAAAAAAGTTGGTCTTGCCGGCAAGCGAGATGTTAT 77941
Query 16734 CCATGAAATCAAAAGGATTAGTAG-CTGAAAATATTTTAGAGTACCCCAGTTCGGCGATT 16792
||||||| || || || || || | | | ||| ||| || || || | | | |
Sbjct 77942 CCATGAAGTCGAATGGGTTCGTGGAGTTATAAT-GTTTCTTGTTGCCAAGAGCTACAAGT 78000
Query 16793 AATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA 16852
|| | || ||||| || || || ||||||||||| || | | ||||||| || | |||
Sbjct 78001 AACCGGTCGGCTACGAACTCGATGTATTGGCACATCAACTTGGAGTTCATGCCAAGGAGA 78060
Query 16853 CGTAC-CGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAAT 16911
| || |||||||| ||||| || ||| |||||| || | || ||||| | || ||
Sbjct 78061 -GCACATGGAAGAGCATCCGTTAAGAATTCTTGCTCGATTTCCACGGCTTCAATGATGAT 78119
Query 16912 ACTAGCAACTCGTTC----CTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATG 16967
||||| ||| || |||||||| | || || || | || || |
Sbjct 78120 TGCTGCAACAGCTTCTGGGCTGGGACGGTGGCGG----AGGTGAGAGAAGAGGAGGCAAG 78175
Query 16968 CGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGG 17027
| || || || | |||||||| | ||| || ||||| || || || | || |
Sbjct 78176 CAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTAAGGCCAG 78235
Query 17028 GCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATAC 17087
|||| || || ||||||||||| || || | || || || ||| ||||| ||||
Sbjct 78236 GCATGAGACCACGCTTCTTTAACCAGAAAATAGAAGCAAAAGAACCACTGAAGAAGATAC 78295
Query 17088 CCTCGAC 17094
|||| ||
Sbjct 78296 CCTCAAC 78302
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545347696520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |