Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq6 82.4 8e-11
>seq6
Length=1499889
Score = 82.4 bits (90), Expect = 8e-11
Identities = 114/160 (71%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531
|| || || |||||||| | ||| ||||||| || ||||| || || ||||||
Sbjct 78496 ATGTATGTGTCAATCAGAAGGGAGTATGTTTCTGAATGGATGTTTTCCATCATGATCTGA 78555
Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591
||||||||||| || || ||||| | ||||| ||||| | || || ||| | |||
Sbjct 78556 AATCCATAGAAACAACGGGCCTCTGGGATTTGGACTTCACCACTGAAGCGCTCCACAAGG 78615
Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCA 16631
||||| || || || |||||| || || || || ||||
Sbjct 78616 TTCTCGTTGACAATTCCGTCAGAAGCGGCGAAGAATGCCA 78655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511414150685480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |