Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq7 212 7e-50
seq6 82.4 9e-11
>seq7
Length=1353353
Score = 212 bits (234), Expect = 7e-50
Identities = 552/835 (66%), Gaps = 15/835 (2%)
Strand=Plus/Minus
Query 54018 CGTCATCCTTC---ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGAT 54074
|| ||| |||| || |||||||| || | || ||| |||| || || | || ||||
Sbjct 416136 CGCCATTCTTCTCAACCCGTTTCATGAACAAGTCGGGAGTCCAGAGGGCGAGGAAAAGAT 416077
Query 54075 CTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGCCATAA 54131
||| || ||| ||| || || || || |||||| || || | ||| | | |
Sbjct 416076 CTCGGGCTCTCACTTCTTCTTTACC---ATGATTTTTACGGAGGTCCAAAAACTCAAATA 416020
Query 54132 TATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCT 54191
||||| ||||| ||||| | || || | | | | ||||| ||||| || || ||||
Sbjct 416019 CGTCAGAGTGCCAAGGTTCAAGATAAATAGCAAAAGCACCAGGGCGTTTATTGCCGCCCT 415960
Query 54192 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATG 54251
|||| | ||||| || || || ||| | || | | ||| ||||| || ||||| || |
Sbjct 415959 GATCCACATATCTGGCAGTATTGTTAAAGACACGAAGCATGGGAATGATCCCATTAGAGG 415900
Query 54252 CACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AGACCT 54310
||||| || || | || ||| ||| | ||||| || | | | | | || ||
Sbjct 415899 AGCCATTTGTTCCTGCAATGTAGGAGCCAGTTGCACGGAT-TCGGTGAACGTTGAGTCCA 415841
Query 54311 ATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCT 54370
|| ||||| || | || || || | || ||| || | ||||||||||| |||||
Sbjct 415840 ATACCCCCAGCAGTCTTGGAAATCAGAGCACATGTCTTCAGTGTATCATAGATCCCCTCA 415781
Query 54371 ATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCC 54430
|||||||| ||| |||| | || || || ||| || ||| || | || ||||||
Sbjct 415780 ATACTATCCTCCTTCATATCAATAAGGAAGCAGGAAGCCATCTGTGGTTGAGGTGTTCCC 415721
Query 54431 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 54490
||||| || | || ||||||||||| ||||| |||||| || | || | ||| |||
Sbjct 415720 GCATTGAAAAGTGTGGGAGAAGCGTGGGTAAAAAATTTTTGGGACATCAGGTGGTATGTC 415661
Query 54491 TCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 54550
|| || ||| || || ||| |||||||| || || || || ||||| | ||| |||
Sbjct 415660 TCAATCGCTTTATCAATGTCCTCATGATGAATACCAACGGCAACGCGCATAATCATATGC 415601
Query 54551 TGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTA 54610
|| || | |||| | | ||| ||| ||| | || | || || | |||| || ||
Sbjct 415600 TGCGGACGTTCAGCAACTTTGCCGTTGATTCTTAGTAGATACGACCTCTCCAGTGTCTTG 415541
Query 54611 AAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTAT 54668
|| ||||| || | ||| ||||| || || || |||| ||| | ||||| || | |
Sbjct 415540 AACCCAAAGTACTGGTAGTTGAAA--TCACGGTCATAAACGATAGCGGAGTTCAGCTCTT 415483
Query 54669 CCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCAT 54728
| | ||| | || | ||| | | || || || || |||| | | |
Sbjct 415482 CGGCGTGTTTCATTACAATATCGTATATTTTTCTGGATATCATGGGAGCAGGGCGGTTGT 415423
Query 54729 TTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTT 54788
| || || || ||||| || | | ||| | || || |||| |||| || ||||
Sbjct 415422 TCTTTGGGTTCACATATCTATAGAGATCTTCGATAACGGACGAAAATTGTTTCTTGGTTT 415363
Query 54789 CTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843
||||| | || || ||||| |||||||| || || ||||||||||| || ||
Sbjct 415362 GCTTGTGCAAGTTGGACACGGCGATTCTAGCAGCAAGGATGGCATAATCAGGGTG 415308
Score = 109 bits (120), Expect = 7e-19
Identities = 348/536 (65%), Gaps = 13/536 (2%)
Strand=Plus/Minus
Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867
||||||||||| || || || || | | || || ||||||||||| || ||||| | |
Sbjct 417403 GTGAATTGAATTGGGGCAGAAGCAGCCATAGTCCGAAGATAGTACATGCCGGTTTTCAAA 417344
Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATA 52927
|| | |||| || ||||||||| || || | |||| | || || | |
Sbjct 417343 CCTAATTTCCAGCCAGCAAAATGCATGCTAGTAATTTTGCCCATTGTGGGCTCCTTAAGA 417284
Query 52928 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 52987
|| ||||| | ||||| |||||||||||| || || | ||||||||||| | |
Sbjct 417283 TGAATATTGAGGGATTGGGATTGATCGATGAAAGCACCACGATCTGCAGCCATCTGAACA 417224
Query 52988 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 53047
|| ||| || | ||||||||| | ||| || |||| || || || || || |
Sbjct 417223 ATAGTCCGCTGAGAAATTTCCCATACAGTCTTGTAAAGGGCTTTGATGTCATCGGGGATA 417164
Query 53048 TTTG---TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 53104
|| | |||| ||||| || |||||||| | || || | ||| || || | ||| |
Sbjct 417163 TTGGGAATATTTTGAATTGAGCCACCATCAGCGATGATGCGATTTTTCATGTTGTCAGAC 417104
Query 53105 CATAATTTTCTCTCGGTTAA----AACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 53160
|| | | | ||| || | || | || || || ||||| ||||| |||||
Sbjct 417103 CAAAGT----CCAAGGTCAACAAGATCTTTCAGAAGCCATGGGTTAACAACTTGGAATTC 417048
Query 53161 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATT 53220
||| | | |||| ||||| || ||||| ||| || || || | | || ||
Sbjct 417047 TCCTGCAAGGACTCGCCGAGAATAGATATTTGAGGTGTATGGCTCAAAGCATTCGTTGAA 416988
Query 53221 TCCCAAAATTTGAGCAGTTGAT-GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 53279
|| | ||||| || | | | ||||| |||||||| || || | | ||| || | |
Sbjct 416987 GCCAAGGATTTG-GCTGGTACTAGCAGTGGGCATAGGGGCAACAAGAAGACTGTTGCGTA 416929
Query 53280 GACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGT 53335
||||| | || |||| | || |||| |||||| |||||| || || |||
Sbjct 416928 CACCGTGTTTTGCTATTTCTTTCTTAAGAGAAACCCAATCCCAAAGGTCAGAAGGT 416873
>seq6
Length=1499889
Score = 82.4 bits (90), Expect = 9e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 24149 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 24208
||| ||||||||||| | | || | |||||||| || || || || ||||| || ||
Sbjct 78186 GTGAAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTAAGGCCAGGCATGAGACC 78245
Query 24209 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 24268
|||||| || | ||| || || || ||||| || ||| ||||| || || || || ||
Sbjct 78246 ACGCTTCTTTAACCAGAAAATAGAAGCAAAAGAACCACTGAAGAAGATACCCTCAACAGC 78305
Query 24269 CGCAAAGGCAATAAG 24283
|| || ||||||||
Sbjct 78306 GGCGAAAGCAATAAG 78320
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593721310560720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |