Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq9 96.9 3e-15 seq2 93.3 4e-14 >seq9 Length=1275601 Score = 96.9 bits (106), Expect = 3e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037 |||||||||||| |||||||| || |||| ||||| | | ||||| || ||||| || Sbjct 1015387 AGTGGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGACCATCCTCGAGTTGTTTACC 1015328 Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097 || | || | || |||||||| ||| | |||||| ||||| |||||| ||| Sbjct 1015327 AGCGAAGATCAATCGTTGCTGGTCGGGGGGGATGCCTTCTTTGTCCTGGATCTTGGTTTT 1015268 Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157 ||| | | ||| |||||| | ||| || | |||||| |||||||| || | || Sbjct 1015267 CACATTGTCGATGGTATCAGAAGACTCGACCTCAAGGGTAATAGTCTTGCCAGTAAGAGT 1015208 Query 21158 TTTGACAA 21165 ||||||| Sbjct 1015207 CTTGACAA 1015200 >seq2 Length=1931404 Score = 93.3 bits (102), Expect = 4e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||||||||| || ||||| ||||||| ||||| || | ||||||||||||||||| Sbjct 802205 GTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTCCAGCTGTTTGCCG 802146 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082 || |||| || | ||||||||| ||| | ||| |||||||| Sbjct 802145 GCGAAAATCAGACGCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 802102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258999294924