Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq9 113 7e-20 >seq9 Length=1275601 Score = 113 bits (124), Expect = 7e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || |||| || |||| || ||||| || || |||| |||| | | Sbjct 1015418 ATGCAAATTTTCGTAAAAACCTTAACCGGAAAAACAATCACATTAGAAGTTGAGTCTTCT 1015477 Query 124599 GATACAATTTCTAATTT-AAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| || || | |||||| || |||||||||||||||||||| ||||| || || Sbjct 1015478 GATACGATCGACAACGTCAAAACA-AAGATTCAAGATAAAGAAGGTATCCCACCAGACCA 1015536 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| | || || || || || |||||| | ||||| | || ||| | ||||| || Sbjct 1015537 GCAACGCCTAATCTTCGCCGGTAAACAACTCGAGGACGGCCGCACACTGTCTGATTACAA 1015596 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || |||||||| || || | || | ||||| || || || |||||||| Sbjct 1015597 CATCCAAAAAGAGTCTACCCTCCACCTTGTTTTGCGGTTGCGCGGTGGTAT 1015647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755455631715200