Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq9 120 2e-22
>seq9
Length=1275601
Score = 120 bits (132), Expect = 2e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || ||||||||||| |||||||||||| || ||| | || ||
Sbjct 1015111 ACCAAGTGGAGGGTACTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCA 1015052
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| ||||| || ||||| ||||| || |||||||| ||||| | |||||||||||
Sbjct 1015051 AGCTGTTTACCAGCGAAAATCAAGCGTTGTTGGTCTGGAGGGATGCCCTCCTTGTCTTGG 1014992
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || |||||| | | | | || | ||| ||||| | ||| || ||||||
Sbjct 1014991 ATCTTAGTCTTAACATTATCAATGGTATCGCTGGACTCGACCTCAAGGGTGATGGTCTTG 1014932
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| ||||| ||||| || ||||| |||||
Sbjct 1014931 CCAGTCAGGGTCTTGACGAAGATCTGCAT 1014903
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|| || | |||||| || ||||||||||| |||||||| ||||| || ||||||||
Sbjct 1015872 CCTCCACGCAATCTCAAAACCAAGTGCAGAGTGCTCTCTTTCTGGATATTGTAGTCTGAA 1015813
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| || | || || ||||| || ||||| || || | |||||||||||||| ||
Sbjct 1015812 AGCGTACGGCCATCTTCAAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGGA 1015753
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| ||| ||||| ||| ||||||| ||| || | | ||||| | || ||
Sbjct 1015752 ATACCTTCCTTATCCTGAATTTTTGTCTTGACATTGTCAATCGTGTCCGAAGATTCAACT 1015693
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| | || || |||||||| || || || || ||||| || |||||
Sbjct 1015692 TCTAATGTGATGGTCTTGCCGGTAAGTGTTTTGACAAAAATCTGCAT 1015646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395075012215819
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |