Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq9 82.4 6e-11 >seq9 Length=1275601 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||| || | ||| | |||| ||| || || ||||| || || |||||||| | Sbjct 1015873 TCCTCCACGCAATCTCAAAACCAAGTGCAGAGTGCTCTCTTTCTGGATATTGTAGTCTGA 1015814 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | || | |||||| | ||| ||||| ||| |||| || | ||||| || || Sbjct 1015813 AAGCGTACGGCCATCTTCAAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGG 1015754 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||||||||| ||||| | |||||| | ||| ||||| | || Sbjct 1015753 AATACCTTCCTTATCCTGAATTTTTGTCTTGACATTGTCAATCGTGTCCGAAGATTCAAC 1015694 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | |||||| | |||||||| | |||||| |||||||| ||||| Sbjct 1015693 TTCTAATGTGATGGTCTTGCCGGTAAGTGTTTTGACAAAAATCTGCAT 1015646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379343819693055