Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq7 199 5e-46 seq6 91.5 2e-13 >seq7 Length=1353353 Score = 199 bits (220), Expect = 5e-46 Identities = 549/835 (66%), Gaps = 15/835 (2%) Strand=Plus/Minus Query 63256 CGTCATCCTTC---ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGAT 63312 || ||| |||| || |||||||| || | || ||| |||| || || | || |||| Sbjct 416136 CGCCATTCTTCTCAACCCGTTTCATGAACAAGTCGGGAGTCCAGAGGGCGAGGAAAAGAT 416077 Query 63313 CTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGCCATAA 63369 ||| | ||| ||| || || || || |||||| || || | ||| | | | Sbjct 416076 CTCGGGCTCTCACTTCTTCTTTACC---ATGATTTTTACGGAGGTCCAAAAACTCAAATA 416020 Query 63370 TATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCT 63429 ||||| ||||| ||||| | || || || | | | ||||| ||||| || || |||| Sbjct 416019 CGTCAGAGTGCCAAGGTTCAAGATAAATAGCAAAAGCACCAGGGCGTTTATTGCCGCCCT 415960 Query 63430 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATA 63489 |||| | ||||| || || || ||| | || | | ||| ||||| || || || || Sbjct 415959 GATCCACATATCTGGCAGTATTGTTAAAGACACGAAGCATGGGAATGATCCCATTAGAGG 415900 Query 63490 TACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGAT-AGACCT 63548 ||||| || || | || ||| ||| | ||||| || | | | | | || || Sbjct 415899 AGCCATTTGTTCCTGCAATGTAGGAGCCAGTTGCACGGAT-TCGGTGAACGTTGAGTCCA 415841 Query 63549 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCT 63608 || ||||| || | || || || | || ||| || | || |||||||| || || Sbjct 415840 ATACCCCCAGCAGTCTTGGAAATCAGAGCACATGTCTTCAGTGTATCATAGATCCCCTCA 415781 Query 63609 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCC 63668 || ||||| || |||| | || || || ||| || ||| || | ||| |||||| Sbjct 415780 ATACTATCCTCCTTCATATCAATAAGGAAGCAGGAAGCCATCTGTGGTTGAGGTGTTCCC 415721 Query 63669 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63728 ||||| || | || ||||||||||| ||||| |||||| || | || | ||| ||| Sbjct 415720 GCATTGAAAAGTGTGGGAGAAGCGTGGGTAAAAAATTTTTGGGACATCAGGTGGTATGTC 415661 Query 63729 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 63788 ||||| ||| || || ||| |||||||| || || || || ||||| | ||| ||| Sbjct 415660 TCAATCGCTTTATCAATGTCCTCATGATGAATACCAACGGCAACGCGCATAATCATATGC 415601 Query 63789 TGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 63848 || || | |||| ||| |||| ||| ||| | | | || || | |||| || || Sbjct 415600 TGCGGACGTTCAGCAACTTTGCCGTTGATTCTTAGTAGATACGACCTCTCCAGTGTCTTG 415541 Query 63849 AAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTAT 63906 || ||||| || | ||| ||||| || || || |||| ||| | || || |||| | Sbjct 415540 AACCCAAAGTACTGGTAGTTGAAA--TCACGGTCATAAACGATAGCGGAGTTCAGCTCTT 415483 Query 63907 CCTTATATTTGTTAACTATATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCAT 63966 | | ||| | || ||||| | | || || || || |||| | | | Sbjct 415482 CGGCGTGTTTCATTACAATATCGTATATTTTTCTGGATATCATGGGAGCAGGGCGGTTGT 415423 Query 63967 TTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTT 64026 | || || || ||||| | | | ||| || || || |||| |||| || |||| Sbjct 415422 TCTTTGGGTTCACATATCTATAGAGATCTTCGATAACGGACGAAAATTGTTTCTTGGTTT 415363 Query 64027 CCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64081 |||||| | || || | ||| ||||| || || || ||||||||||| || || Sbjct 415362 GCTTGTGCAAGTTGGACACGGCGATTCTAGCAGCAAGGATGGCATAATCAGGGTG 415308 Score = 136 bits (150), Expect = 5e-27 Identities = 702/1112 (63%), Gaps = 21/1112 (2%) Strand=Plus/Minus Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105 ||||||||||| || || || || | | || || ||||||||||| || ||||| | | Sbjct 417403 GTGAATTGAATTGGGGCAGAAGCAGCCATAGTCCGAAGATAGTACATGCCGGTTTTCAAA 417344 Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165 || | |||| || ||||||||| || || | |||| | || || | | Sbjct 417343 CCTAATTTCCAGCCAGCAAAATGCATGCTAGTAATTTTGCCCATTGTGGGCTCCTTAAGA 417284 Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225 || ||||| | ||||| |||||||||||| || || | ||||||||||| | | Sbjct 417283 TGAATATTGAGGGATTGGGATTGATCGATGAAAGCACCACGATCTGCAGCCATCTGAACA 417224 Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62285 || ||| || | ||||||||| | ||| || |||| || || || || || | Sbjct 417223 ATAGTCCGCTGAGAAATTTCCCATACAGTCTTGTAAAGGGCTTTGATGTCATCGGGGATA 417164 Query 62286 TTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 62342 || | |||| ||||| || |||||||| | || || | ||| || || | ||| | Sbjct 417163 TTGGGAATATTTTGAATTGAGCCACCATCAGCGATGATGCGATTTTTCATGTTGTCAGAC 417104 Query 62343 CATAATTTTCTCTCGGTTAA----AACTCTAAGGAGATGCGGGTTAACTACTTGGAATTC 62398 || | | | ||| || | || | || || |||||||| ||||||||||| Sbjct 417103 CAAAGT----CCAAGGTCAACAAGATCTTTCAGAAGCCATGGGTTAACAACTTGGAATTC 417048 Query 62399 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATT 62458 ||| | | |||| ||||| || ||||| ||| || || || | | || || Sbjct 417047 TCCTGCAAGGACTCGCCGAGAATAGATATTTGAGGTGTATGGCTCAAAGCATTCGTTGAA 416988 Query 62459 TCCCAAAATTTGAGCAGTTGAT-GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 62517 || | ||||| || | | | ||||| |||||||| || || | | ||| || | | Sbjct 416987 GCCAAGGATTTG-GCTGGTACTAGCAGTGGGCATAGGGGCAACAAGAAGACTGTTGCGTA 416929 Query 62518 GACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAA 62577 ||||| | || |||| | || ||| |||||| |||||| || || ||| | Sbjct 416928 CACCGTGTTTTGCTATTTCTTTCTTAAGAGAAACCCAATCCCAAAGGTCAGAAGGTGTTA 416869 Query 62578 CANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCAT 62637 | ||| || | ||| || | | | || ||| ||||||| || | Sbjct 416868 CGTTCCACATATCATACTGCAAAATTCCCTGAGAAACAGGAGAACCTTCATATGTTTCGT 416809 Query 62638 ATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTT 62697 |||| ||||| ||| | |||| || || | || | | ||||| || | Sbjct 416808 ATGGGCCTTCGGTCTTTGAAAGTTCGCAGGATGCAGTCAGGGCGGCATGGTAAATTGTCT 416749 Query 62698 CAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAG-A 62756 ||||||||| |||| || | | || | | | ||||| || || | |||| Sbjct 416748 CAAAGATCTGAATATTCAGCTGCTTAGCCTGAGAGGAGTCAAAAGGCAAACGT-AGAGCC 416690 Query 62757 ATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 62816 | || || || || | ||||||||| |||| | | || || | ||| | ||| Sbjct 416689 AAGAAGGCATCAGCGAGTCCTTGAACCCCAAGAGCAATTGGGCGATGACGGAAGTTACTC 416630 Query 62817 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACA 62876 || |||||| |||| || || | || |||| || || || || | ||| | || Sbjct 416629 TTTCGAGCTTCGGGAACGGGGTAGTGGTTGTTATCAATGATCTTGTTTAAATTGCGCACC 416570 Query 62877 ATTACTTTGACCACATCCTTCAGTTTGAGAAAATC-AAATCGCC-CATCTATTACAAAC- 62933 | |||| | || | | || ||| ||| || | ||||| | || ||| Sbjct 416569 ACAACTTGGGTGACTGCGTGCAATTTACCAAAGTCGTACTCGCCGCGGATAGCGTCAACG 416510 Query 62934 -ATGTT--CAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATAT 62990 ||||| ||| |||| ||||| ||||| |||||||| || |||| | | | ||| Sbjct 416509 TATGTTGGCAAAGCAAGTGATGCTAGATTGCACACGGCGACTTCATCGGGGGCAGTATAC 416450 Query 62991 TGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTC 63050 | || || || || || | |||| || | |||||||| | || | || || ||| Sbjct 416449 TCAATAATTTCCGTACATAAATTAGAACTTCTAATAGTTCCAAGGTTCTTCTGGTTGCTC 416390 Query 63051 TTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCT 63110 || ||||| |||||||| ||||| ||||| ||| | ||||| || | |||| ||| Sbjct 416389 TTCCGATTACAGGCATCCTTGTAAAGCATGAAAGGATTTCCAGTCTCGGTTTGAGCTTCC 416330 Query 63111 ATAATCGCTTTCCAGACGACTCGAGCCTTTAT 63142 | || || | ||||| | ||||||| || Sbjct 416329 AAGATAGCGTACCAGAGCTTTTGAGCCTTGAT 416298 >seq6 Length=1499889 Score = 91.5 bits (100), Expect = 2e-13 Identities = 221/333 (66%), Gaps = 5/333 (2%) Strand=Plus/Plus Query 33804 GTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATC 33863 || || || |||| |||||||||| | || || ||||| | || || || ||| Sbjct 78451 GTATCGATAGCATCAAAGAGATAGGTACGTTGCTTCGGTTCTTTGATGTATGTGTCAATC 78510 Query 33864 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACAT 33923 | ||| || |||| ||||| |||||||| || ||||||||||| |||||||| Sbjct 78511 AGAAGGGAGTATGTTTCTGAATGGATGTTTTCCATCATGATCTGAAATCCATAGAAACAA 78570 Query 33924 CTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATT 33983 | ||||| | || || ||||| || || || || | | || || || || ||| Sbjct 78571 CGGGCCTCTGGGATTTGGACTTCACCACTGAAGCGCTCCACAAGGTTCTCGTTGACAATT 78630 Query 33984 CCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC----TGG 34039 || ||| || || || || |||| ||| | | ||| ||| ||||| | | Sbjct 78631 CCGTCAGAAGCGGCGAAGAATGCCAGCACACGAGAGACAAAGTATCGCTCGTCATCATTG 78690 Query 34040 TGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAA 34099 ||| | || ||||| || | | |||||| || | || | || || | ||||| || Sbjct 78691 AGTTTG-TTGTTCCAGTCGTGAAGATCTTTGGACAAGTCGATCTCCTCAGCAGTCCAGAA 78749 Query 34100 TGATGCCTCTGCCTTTTTATACATATTCCAGAT 34132 ||||| || ||||| || ||||| | |||||| Sbjct 78750 AGATGCTTCAGCCTTCTTGTACATTTGCCAGAT 78782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817292963920