Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq7 199 5e-46
seq6 91.5 2e-13
>seq7
Length=1353353
Score = 199 bits (220), Expect = 5e-46
Identities = 549/835 (66%), Gaps = 15/835 (2%)
Strand=Plus/Minus
Query 63256 CGTCATCCTTC---ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGAT 63312
|| ||| |||| || |||||||| || | || ||| |||| || || | || ||||
Sbjct 416136 CGCCATTCTTCTCAACCCGTTTCATGAACAAGTCGGGAGTCCAGAGGGCGAGGAAAAGAT 416077
Query 63313 CTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGCCATAA 63369
||| | ||| ||| || || || || |||||| || || | ||| | | |
Sbjct 416076 CTCGGGCTCTCACTTCTTCTTTACC---ATGATTTTTACGGAGGTCCAAAAACTCAAATA 416020
Query 63370 TATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCT 63429
||||| ||||| ||||| | || || || | | | ||||| ||||| || || ||||
Sbjct 416019 CGTCAGAGTGCCAAGGTTCAAGATAAATAGCAAAAGCACCAGGGCGTTTATTGCCGCCCT 415960
Query 63430 GATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATA 63489
|||| | ||||| || || || ||| | || | | ||| ||||| || || || ||
Sbjct 415959 GATCCACATATCTGGCAGTATTGTTAAAGACACGAAGCATGGGAATGATCCCATTAGAGG 415900
Query 63490 TACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGAT-AGACCT 63548
||||| || || | || ||| ||| | ||||| || | | | | | || ||
Sbjct 415899 AGCCATTTGTTCCTGCAATGTAGGAGCCAGTTGCACGGAT-TCGGTGAACGTTGAGTCCA 415841
Query 63549 ATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCT 63608
|| ||||| || | || || || | || ||| || | || |||||||| || ||
Sbjct 415840 ATACCCCCAGCAGTCTTGGAAATCAGAGCACATGTCTTCAGTGTATCATAGATCCCCTCA 415781
Query 63609 ATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCC 63668
|| ||||| || |||| | || || || ||| || ||| || | ||| ||||||
Sbjct 415780 ATACTATCCTCCTTCATATCAATAAGGAAGCAGGAAGCCATCTGTGGTTGAGGTGTTCCC 415721
Query 63669 GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTC 63728
||||| || | || ||||||||||| ||||| |||||| || | || | ||| |||
Sbjct 415720 GCATTGAAAAGTGTGGGAGAAGCGTGGGTAAAAAATTTTTGGGACATCAGGTGGTATGTC 415661
Query 63729 TCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGC 63788
||||| ||| || || ||| |||||||| || || || || ||||| | ||| |||
Sbjct 415660 TCAATCGCTTTATCAATGTCCTCATGATGAATACCAACGGCAACGCGCATAATCATATGC 415601
Query 63789 TGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTA 63848
|| || | |||| ||| |||| ||| ||| | | | || || | |||| || ||
Sbjct 415600 TGCGGACGTTCAGCAACTTTGCCGTTGATTCTTAGTAGATACGACCTCTCCAGTGTCTTG 415541
Query 63849 AAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTAT 63906
|| ||||| || | ||| ||||| || || || |||| ||| | || || |||| |
Sbjct 415540 AACCCAAAGTACTGGTAGTTGAAA--TCACGGTCATAAACGATAGCGGAGTTCAGCTCTT 415483
Query 63907 CCTTATATTTGTTAACTATATCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCAT 63966
| | ||| | || ||||| | | || || || || |||| | | |
Sbjct 415482 CGGCGTGTTTCATTACAATATCGTATATTTTTCTGGATATCATGGGAGCAGGGCGGTTGT 415423
Query 63967 TTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTT 64026
| || || || ||||| | | | ||| || || || |||| |||| || ||||
Sbjct 415422 TCTTTGGGTTCACATATCTATAGAGATCTTCGATAACGGACGAAAATTGTTTCTTGGTTT 415363
Query 64027 CCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64081
|||||| | || || | ||| ||||| || || || ||||||||||| || ||
Sbjct 415362 GCTTGTGCAAGTTGGACACGGCGATTCTAGCAGCAAGGATGGCATAATCAGGGTG 415308
Score = 136 bits (150), Expect = 5e-27
Identities = 702/1112 (63%), Gaps = 21/1112 (2%)
Strand=Plus/Minus
Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105
||||||||||| || || || || | | || || ||||||||||| || ||||| | |
Sbjct 417403 GTGAATTGAATTGGGGCAGAAGCAGCCATAGTCCGAAGATAGTACATGCCGGTTTTCAAA 417344
Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 62165
|| | |||| || ||||||||| || || | |||| | || || | |
Sbjct 417343 CCTAATTTCCAGCCAGCAAAATGCATGCTAGTAATTTTGCCCATTGTGGGCTCCTTAAGA 417284
Query 62166 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 62225
|| ||||| | ||||| |||||||||||| || || | ||||||||||| | |
Sbjct 417283 TGAATATTGAGGGATTGGGATTGATCGATGAAAGCACCACGATCTGCAGCCATCTGAACA 417224
Query 62226 ATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62285
|| ||| || | ||||||||| | ||| || |||| || || || || || |
Sbjct 417223 ATAGTCCGCTGAGAAATTTCCCATACAGTCTTGTAAAGGGCTTTGATGTCATCGGGGATA 417164
Query 62286 TTTG---TATTCTGAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCATTC 62342
|| | |||| ||||| || |||||||| | || || | ||| || || | ||| |
Sbjct 417163 TTGGGAATATTTTGAATTGAGCCACCATCAGCGATGATGCGATTTTTCATGTTGTCAGAC 417104
Query 62343 CATAATTTTCTCTCGGTTAA----AACTCTAAGGAGATGCGGGTTAACTACTTGGAATTC 62398
|| | | | ||| || | || | || || |||||||| |||||||||||
Sbjct 417103 CAAAGT----CCAAGGTCAACAAGATCTTTCAGAAGCCATGGGTTAACAACTTGGAATTC 417048
Query 62399 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATT 62458
||| | | |||| ||||| || ||||| ||| || || || | | || ||
Sbjct 417047 TCCTGCAAGGACTCGCCGAGAATAGATATTTGAGGTGTATGGCTCAAAGCATTCGTTGAA 416988
Query 62459 TCCCAAAATTTGAGCAGTTGAT-GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 62517
|| | ||||| || | | | ||||| |||||||| || || | | ||| || | |
Sbjct 416987 GCCAAGGATTTG-GCTGGTACTAGCAGTGGGCATAGGGGCAACAAGAAGACTGTTGCGTA 416929
Query 62518 GACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGATCCGACGGTACAA 62577
||||| | || |||| | || ||| |||||| |||||| || || ||| |
Sbjct 416928 CACCGTGTTTTGCTATTTCTTTCTTAAGAGAAACCCAATCCCAAAGGTCAGAAGGTGTTA 416869
Query 62578 CANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCAT 62637
| ||| || | ||| || | | | || ||| ||||||| || |
Sbjct 416868 CGTTCCACATATCATACTGCAAAATTCCCTGAGAAACAGGAGAACCTTCATATGTTTCGT 416809
Query 62638 ATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTT 62697
|||| ||||| ||| | |||| || || | || | | ||||| || |
Sbjct 416808 ATGGGCCTTCGGTCTTTGAAAGTTCGCAGGATGCAGTCAGGGCGGCATGGTAAATTGTCT 416749
Query 62698 CAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAG-A 62756
||||||||| |||| || | | || | | | ||||| || || | ||||
Sbjct 416748 CAAAGATCTGAATATTCAGCTGCTTAGCCTGAGAGGAGTCAAAAGGCAAACGT-AGAGCC 416690
Query 62757 ATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 62816
| || || || || | ||||||||| |||| | | || || | ||| | |||
Sbjct 416689 AAGAAGGCATCAGCGAGTCCTTGAACCCCAAGAGCAATTGGGCGATGACGGAAGTTACTC 416630
Query 62817 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACA 62876
|| |||||| |||| || || | || |||| || || || || | ||| | ||
Sbjct 416629 TTTCGAGCTTCGGGAACGGGGTAGTGGTTGTTATCAATGATCTTGTTTAAATTGCGCACC 416570
Query 62877 ATTACTTTGACCACATCCTTCAGTTTGAGAAAATC-AAATCGCC-CATCTATTACAAAC- 62933
| |||| | || | | || ||| ||| || | ||||| | || |||
Sbjct 416569 ACAACTTGGGTGACTGCGTGCAATTTACCAAAGTCGTACTCGCCGCGGATAGCGTCAACG 416510
Query 62934 -ATGTT--CAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATAT 62990
||||| ||| |||| ||||| ||||| |||||||| || |||| | | | |||
Sbjct 416509 TATGTTGGCAAAGCAAGTGATGCTAGATTGCACACGGCGACTTCATCGGGGGCAGTATAC 416450
Query 62991 TGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTC 63050
| || || || || || | |||| || | |||||||| | || | || || |||
Sbjct 416449 TCAATAATTTCCGTACATAAATTAGAACTTCTAATAGTTCCAAGGTTCTTCTGGTTGCTC 416390
Query 63051 TTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCT 63110
|| ||||| |||||||| ||||| ||||| ||| | ||||| || | |||| |||
Sbjct 416389 TTCCGATTACAGGCATCCTTGTAAAGCATGAAAGGATTTCCAGTCTCGGTTTGAGCTTCC 416330
Query 63111 ATAATCGCTTTCCAGACGACTCGAGCCTTTAT 63142
| || || | ||||| | ||||||| ||
Sbjct 416329 AAGATAGCGTACCAGAGCTTTTGAGCCTTGAT 416298
>seq6
Length=1499889
Score = 91.5 bits (100), Expect = 2e-13
Identities = 221/333 (66%), Gaps = 5/333 (2%)
Strand=Plus/Plus
Query 33804 GTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATC 33863
|| || || |||| |||||||||| | || || ||||| | || || || |||
Sbjct 78451 GTATCGATAGCATCAAAGAGATAGGTACGTTGCTTCGGTTCTTTGATGTATGTGTCAATC 78510
Query 33864 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACAT 33923
| ||| || |||| ||||| |||||||| || ||||||||||| ||||||||
Sbjct 78511 AGAAGGGAGTATGTTTCTGAATGGATGTTTTCCATCATGATCTGAAATCCATAGAAACAA 78570
Query 33924 CTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATT 33983
| ||||| | || || ||||| || || || || | | || || || || |||
Sbjct 78571 CGGGCCTCTGGGATTTGGACTTCACCACTGAAGCGCTCCACAAGGTTCTCGTTGACAATT 78630
Query 33984 CCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC----TGG 34039
|| ||| || || || || |||| ||| | | ||| ||| ||||| | |
Sbjct 78631 CCGTCAGAAGCGGCGAAGAATGCCAGCACACGAGAGACAAAGTATCGCTCGTCATCATTG 78690
Query 34040 TGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAA 34099
||| | || ||||| || | | |||||| || | || | || || | ||||| ||
Sbjct 78691 AGTTTG-TTGTTCCAGTCGTGAAGATCTTTGGACAAGTCGATCTCCTCAGCAGTCCAGAA 78749
Query 34100 TGATGCCTCTGCCTTTTTATACATATTCCAGAT 34132
||||| || ||||| || ||||| | ||||||
Sbjct 78750 AGATGCTTCAGCCTTCTTGTACATTTGCCAGAT 78782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817292963920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |