Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq7 212 8e-50
seq6 89.7 7e-13
>seq7
Length=1353353
Score = 212 bits (234), Expect = 8e-50
Identities = 590/899 (66%), Gaps = 12/899 (1%)
Strand=Plus/Minus
Query 65982 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 66041
||||| |||||||| | |||| | | | ||||| || | ||||| | | | |
Sbjct 416200 TCGAATTCGTCTCCGTAGACATCGGCGAGTCCAGATGCCTCGTTTGGACAGAATAGTGTC 416141
Query 66042 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 66101
|| || || | | || || |||||||| || | || ||| |||| || || | ||
Sbjct 416140 CAATCGCCATTCTTCTCAACCCGTTTCATGAACAAGTCGGGAGTCCAGAGGGCGAGGAAA 416081
Query 66102 AAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGCC 66158
| ||||| || ||| ||| || || || || |||||| || || | ||| |
Sbjct 416080 AGATCTCGGGCTCTCACTTCTTCTTTACC---ATGATTTTTACGGAGGTCCAAAAACTCA 416024
Query 66159 ATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 66218
| | ||| | ||||| ||||| | || || || | | | ||||| ||||| || ||
Sbjct 416023 AATACGTCAGAGTGCCAAGGTTCAAGATAAATAGCAAAAGCACCAGGGCGTTTATTGCCG 415964
Query 66219 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 66278
|||||||| | ||||| || || || ||| | || | | ||| ||||| || |||||
Sbjct 415963 CCCTGATCCACATATCTGGCAGTATTGTTAAAGACACGAAGCATGGGAATGATCCCATTA 415904
Query 66279 GATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGAT-AG 66337
|| | ||||| || || | || ||| ||| ||||||| || | | | | | ||
Sbjct 415903 GAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTTGCACGGAT-TCGGTGAACGTTGAG 415845
Query 66338 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCC 66397
|| || ||||| || | || || || | || ||| || | ||||||||||| ||
Sbjct 415844 TCCAATACCCCCAGCAGTCTTGGAAATCAGAGCACATGTCTTCAGTGTATCATAGATCCC 415785
Query 66398 CTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT 66457
||| |||||||| ||| |||| | || || || ||| || ||| || | || ||
Sbjct 415784 CTCAATACTATCCTCCTTCATATCAATAAGGAAGCAGGAAGCCATCTGTGGTTGAGGTGT 415725
Query 66458 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 66517
||||||||| || | || ||||||||||| ||||| |||||| || | || | |||
Sbjct 415724 TCCCGCATTGAAAAGTGTGGGAGAAGCGTGGGTAAAAAATTTTTGGGACATCAGGTGGTA 415665
Query 66518 CGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACAT 66577
|||||||| ||| || || ||| |||||||| || || || || ||||| | |||
Sbjct 415664 TGTCTCAATCGCTTTATCAATGTCCTCATGATGAATACCAACGGCAACGCGCATAATCAT 415605
Query 66578 GTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGT 66637
||||| || | |||| | | ||| ||| ||| | | | || || | |||| ||
Sbjct 415604 ATGCTGCGGACGTTCAGCAACTTTGCCGTTGATTCTTAGTAGATACGACCTCTCCAGTGT 415545
Query 66638 TTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 66695
|| || ||||| || | ||| ||||| || || || |||| ||| | ||||| ||
Sbjct 415544 CTTGAACCCAAAGTACTGGTAGTTGAAA--TCACGGTCATAAACGATAGCGGAGTTCAGC 415487
Query 66696 TTATCCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATCGGAGAATGTTTC 66755
| || | ||| | || | ||| | | || || || || |||| | |
Sbjct 415486 TCTTCGGCGTGTTTCATTACAATATCGTATATTTTTCTGGATATCATGGGAGCAGGGCGG 415427
Query 66756 CCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 66815
|| || || || ||||| | | | ||| || || || |||| |||| ||
Sbjct 415426 TTGTTCTTTGGGTTCACATATCTATAGAGATCTTCGATAACGGACGAAAATTGTTTCTTG 415367
Query 66816 GTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATG 66874
|||| ||||| | || || ||||| |||||||| || | ||||||||||| || ||
Sbjct 415366 GTTTGCTTGTGCAAGTTGGACACGGCGATTCTAGCAGCAAGGATGGCATAATCAGGGTG 415308
Score = 116 bits (128), Expect = 5e-21
Identities = 699/1113 (63%), Gaps = 23/1113 (2%)
Strand=Plus/Minus
Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898
||||||||||| || || || || | | || || ||||||||||| || ||||| | |
Sbjct 417403 GTGAATTGAATTGGGGCAGAAGCAGCCATAGTCCGAAGATAGTACATGCCGGTTTTCAAA 417344
Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 64958
|| | |||| || ||||||||| || || | |||| | || || | |
Sbjct 417343 CCTAATTTCCAGCCAGCAAAATGCATGCTAGTAATTTTGCCCATTGTGGGCTCCTTAAGA 417284
Query 64959 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 65018
|| ||||| | ||||| |||||||||||| || || | ||||||||||| | |
Sbjct 417283 TGAATATTGAGGGATTGGGATTGATCGATGAAAGCACCACGATCTGCAGCCATCTGAACA 417224
Query 65019 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 65078
|| ||| || | ||||||||| | ||| || |||| || || || || || |
Sbjct 417223 ATAGTCCGCTGAGAAATTTCCCATACAGTCTTGTAAAGGGCTTTGATGTCATCGGGGATA 417164
Query 65079 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 65135
|| | |||| ||||| || |||||||| || || || | ||| || || | ||| |
Sbjct 417163 TTGGGAATATTTTGAATTGAGCCACCATCAGCGATGATGCGATTTTTCATGTTGTCAGAC 417104
Query 65136 CATAATTTTCTCTCGGTTAA----AACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 65191
|| | | | ||| || | || | || || || ||||| ||||| |||||
Sbjct 417103 CAAAGT----CCAAGGTCAACAAGATCTTTCAGAAGCCATGGGTTAACAACTTGGAATTC 417048
Query 65192 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATT 65251
||| | | |||| ||||| || ||||| ||| || || || | | || ||
Sbjct 417047 TCCTGCAAGGACTCGCCGAGAATAGATATTTGAGGTGTATGGCTCAAAGCATTCGTTGAA 416988
Query 65252 TCCCAAAATTTGAGCAGTTGAT-GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 65310
|| | ||||| || | | | ||||| |||||||| || || | | ||| || | |
Sbjct 416987 GCCAAGGATTTG-GCTGGTACTAGCAGTGGGCATAGGGGCAACAAGAAGACTGTTGCGTA 416929
Query 65311 GACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 65370
||||| | || |||| | || |||| |||||| |||||| || || ||| |
Sbjct 416928 CACCGTGTTTTGCTATTTCTTTCTTAAGAGAAACCCAATCCCAAAGGTCAGAAGGTGTTA 416869
Query 65371 CNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGT 65430
| || | ||| || | | | || ||| ||||||| ||||
Sbjct 416868 CGTTCCACATATCATACTGCAAAATTCCCTGAGAAACAGGAGAACCTTCATATGTTTCGT 416809
Query 65431 ATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTT 65490
|||| ||||| ||| | ||||| || || | || | | ||||| || |
Sbjct 416808 ATGGGCCTTCGGTCTTTGAAAGTTCGCAGGATGCAGTCAGGGCGGCATGGTAAATTGTCT 416749
Query 65491 CGAAGATCTTCTTATTTAGAT-CTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAG- 65548
| ||||||| |||| || | ||| || ||| ||||| || || | ||||
Sbjct 416748 CAAAGATCTGAATATTCAGCTGCTTAGCCTGAGAGG-AGTCAAAAGGCAAACGT-AGAGC 416691
Query 65549 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 65608
| || || || || | ||||||||| |||| | | || || | ||| | |||
Sbjct 416690 CAAGAAGGCATCAGCGAGTCCTTGAACCCCAAGAGCAATTGGGCGATGACGGAAGTTACT 416631
Query 65609 GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGAC 65668
|| |||||| |||| || || | || |||| || || || || | ||| | ||
Sbjct 416630 CTTTCGAGCTTCGGGAACGGGGTAGTGGTTGTTATCAATGATCTTGTTTAAATTGCGCAC 416571
Query 65669 AATTACTTTGACCACATCCTTCAGTTTGAGAAAATC-AAATCG-CTCATCTATTACAAAC 65726
| |||| | || | | || ||| ||| || | ||| | | || |||
Sbjct 416570 CACAACTTGGGTGACTGCGTGCAATTTACCAAAGTCGTACTCGCCGCGGATAGCGTCAAC 416511
Query 65727 --ATGTT--CAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATA 65782
||||| ||| |||| ||||| ||||| || ||||| || |||| | | | |||
Sbjct 416510 GTATGTTGGCAAAGCAAGTGATGCTAGATTGCACACGGCGACTTCATCGGGGGCAGTATA 416451
Query 65783 TTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACT 65842
| || || || || || | |||| || | || ||||| | || | || || ||
Sbjct 416450 CTCAATAATTTCCGTACATAAATTAGAACTTCTAATAGTTCCAAGGTTCTTCTGGTTGCT 416391
Query 65843 CTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTC 65902
||| ||||| |||||||| ||||| ||||| ||| | ||||| || | |||| |||
Sbjct 416390 CTTCCGATTACAGGCATCCTTGTAAAGCATGAAAGGATTTCCAGTCTCGGTTTGAGCTTC 416331
Query 65903 TATAATCGCTTTCCAGACGACTCGAGCCTTTAT 65935
| || || | ||||| | ||||||| ||
Sbjct 416330 CAAGATAGCGTACCAGAGCTTTTGAGCCTTGAT 416298
>seq6
Length=1499889
Score = 89.7 bits (98), Expect = 7e-13
Identities = 137/195 (70%), Gaps = 3/195 (2%)
Strand=Plus/Plus
Query 36172 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 36231
||| ||||||||||| | | || | |||||||| || || || || ||||| || ||
Sbjct 78186 GTGAAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTAAGGCCAGGCATGAGACC 78245
Query 36232 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 36291
|||||| || | ||| || || || ||||| || ||| ||||| || || || || ||
Sbjct 78246 ACGCTTCTTTAACCAGAAAATAGAAGCAAAAGAACCACTGAAGAAGATACCCTCAACAGC 78305
Query 36292 CGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGTATCCACTTTTGAGC 36348
|| || |||||||| | || | || | || |||| || || ||||| |||
Sbjct 78306 GGCGAAAGCAATAAGACGCTGTGCAAATGTGGATTCACTATCCTGGATCCATCGAATAGC 78365
Query 36349 CCAATCGGCCTTCTT 36363
||| ||||| |||||
Sbjct 78366 CCAGTCGGCTTTCTT 78380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172479140760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |