Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq6 86.0 4e-12 >seq6 Length=1499889 Score = 86.0 bits (94), Expect = 4e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800 ||||| | || || || |||||||| || || | || ||| || ||||| | || Sbjct 78323 CGTCTTATTGCTTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGGTTCTTTTGCTTCTATT 78264 Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860 |||||| | ||||| ||| |||||||| || | | || ||||||||| |||| Sbjct 78263 TTCTGGTTAAAGAAGCGTGGTCTCATGCCTGGCCTTACTTTCTCCAACGAGCTGATCTCT 78204 Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTG 22892 |||||||| ||||| ||| |||||||||||| Sbjct 78203 CGTGACGAGGGTCTTCACACTGACTTTGCTTG 78172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356233430677717