Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq9 127 2e-24 >seq9 Length=1275601 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || || |||||||| | ||| | |||||||||||||| ||||| ||||| | Sbjct 1015644 CCACCGCGCAACCGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGAC 1015585 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | ||||| ||| ||||| |||||||| || |||| || |||||||| || || || Sbjct 1015584 AGTGTGCGGCCGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGG 1015525 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTT-AGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || |||||||| || ||| | |||||||| | | || | || || | | ||| || Sbjct 1015524 ATACCTTCTTTATC-TTGAATCTTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCAAC 1015466 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | || || ||||| || ||||||||||| ||||||||| Sbjct 1015465 TTCTAATGTGATTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCATA 1015417 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| || | || | || ||||| | ||| ||| || || ||||| || ||| Sbjct 1015129 CCGCCACGGAGGCGGAGGACCAAGTGGAGGGTACTCTCCTTCTGGATGTTGTAGTCGGAG 1015070 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| |||||||||||||| | |||| ||||| || || ||||| Sbjct 1015069 AGGGTGCGGCCATCTTCAAGCTGTTTACCAGCGAAAATCAAGCGTTGTTGGTCTGGAGGG 1015010 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| || ||||| || | || || ||| | | || | || ||| ||| ||| || Sbjct 1015009 ATGCCCTCCTTGTC-TTGGATCTTAGTCTTAACATTATCAATGGTATCGCTGGACTCGAC 1014951 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| ||| | |||||||| |||| || || ||||| || |||||| Sbjct 1014950 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCATA 1014902 Score = 87.8 bits (96), Expect = 2e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || |||||||| ||||| | |||| || ||||| ||||||||| Sbjct 1015386 GTGGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGACCATCCTCGAGTTGTTTACCA 1015327 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||||| |||||||| ||||| || |||||||||||||| ||| || ||| Sbjct 1015326 GCGAAGATCAATCGTTGCTGGTCGGGGGGGATGCCTTCTTTGTCCTGGATCTTGGTTTTC 1015267 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 | | || | || || | | ||| ||||||| ||| | |||||||| || Sbjct 1015266 ACATTGTCGATGGTATCAGAAGACTCGACCTCAAGGGTAATAGTCTTGCCAGT 1015214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063758168800