Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq9 127 2e-24
>seq9
Length=1275601
Score = 127 bits (140), Expect = 2e-24
Identities = 167/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || || |||||||| | ||| | |||||||||||||| ||||| ||||| |
Sbjct 1015644 CCACCGCGCAACCGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGAC 1015585
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||||| ||| ||||| |||||||| || |||| || |||||||| || || ||
Sbjct 1015584 AGTGTGCGGCCGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGG 1015525
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTT-AGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| |||||||| || ||| | |||||||| | | || | || || | | ||| ||
Sbjct 1015524 ATACCTTCTTTATC-TTGAATCTTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCAAC 1015466
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|| | || | || || ||||| || ||||||||||| |||||||||
Sbjct 1015465 TTCTAATGTGATTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCATA 1015417
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
||||| || | || | || ||||| | ||| ||| || || ||||| || |||
Sbjct 1015129 CCGCCACGGAGGCGGAGGACCAAGTGGAGGGTACTCTCCTTCTGGATGTTGTAGTCGGAG 1015070
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||||| |||||||||||||| | |||| ||||| || || |||||
Sbjct 1015069 AGGGTGCGGCCATCTTCAAGCTGTTTACCAGCGAAAATCAAGCGTTGTTGGTCTGGAGGG 1015010
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716
||||| || ||||| || | || || ||| | | || | || ||| ||| ||| ||
Sbjct 1015009 ATGCCCTCCTTGTC-TTGGATCTTAGTCTTAACATTATCAATGGTATCGCTGGACTCGAC 1014951
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||||| ||| | |||||||| |||| || || ||||| || ||||||
Sbjct 1014950 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCATA 1014902
Score = 87.8 bits (96), Expect = 2e-12
Identities = 123/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| ||||| || |||||||| ||||| | |||| || ||||| |||||||||
Sbjct 1015386 GTGGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGACCATCCTCGAGTTGTTTACCA 1015327
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
|| |||||| |||||||| ||||| || |||||||||||||| ||| || |||
Sbjct 1015326 GCGAAGATCAATCGTTGCTGGTCGGGGGGGATGCCTTCTTTGTCCTGGATCTTGGTTTTC 1015267
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740
| | || | || || | | ||| ||||||| ||| | |||||||| ||
Sbjct 1015266 ACATTGTCGATGGTATCAGAAGACTCGACCTCAAGGGTAATAGTCTTGCCAGT 1015214
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496063758168800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |