Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq7 212 9e-50 seq6 98.7 1e-15 >seq7 Length=1353353 Score = 212 bits (234), Expect = 9e-50 Identities = 590/899 (66%), Gaps = 12/899 (1%) Strand=Plus/Minus Query 79861 TCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGAC 79920 ||||| |||||||| | |||||| | | ||||| |||| ||||| | | | | Sbjct 416200 TCGAATTCGTCTCCGTAGACATCGGCGAGTCCAGATGCCTCGTTTGGACAGAATAGTGTC 416141 Query 79921 CACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 79980 || || |||| | || || |||||||| || | || ||| |||| || || | || Sbjct 416140 CAATCGCCATTCTTCTCAACCCGTTTCATGAACAAGTCGGGAGTCCAGAGGGCGAGGAAA 416081 Query 79981 AGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGCC 80037 ||||||| || ||| || || || || || |||||| || || | ||| | Sbjct 416080 AGATCTCGGGCTCTCACTTCTTCTTTACC---ATGATTTTTACGGAGGTCCAAAAACTCA 416024 Query 80038 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCT 80097 | | ||||| ||||| ||||| | || || || | | | || || ||||| || || Sbjct 416023 AATACGTCAGAGTGCCAAGGTTCAAGATAAATAGCAAAAGCACCAGGGCGTTTATTGCCG 415964 Query 80098 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 80157 |||||||| | ||||| || || || ||| | || | | ||| ||||| || ||||| Sbjct 415963 CCCTGATCCACATATCTGGCAGTATTGTTAAAGACACGAAGCATGGGAATGATCCCATTA 415904 Query 80158 GATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AG 80216 || | ||||| || || | || ||| ||| | ||||| || | | | | | || Sbjct 415903 GAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTTGCACGGAT-TCGGTGAACGTTGAG 415845 Query 80217 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCC 80276 || || ||||| || | || || || | || ||| || | ||||||||||| || Sbjct 415844 TCCAATACCCCCAGCAGTCTTGGAAATCAGAGCACATGTCTTCAGTGTATCATAGATCCC 415785 Query 80277 CTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT 80336 ||| || ||||| || |||| | || || || ||| || ||| || | || || Sbjct 415784 CTCAATACTATCCTCCTTCATATCAATAAGGAAGCAGGAAGCCATCTGTGGTTGAGGTGT 415725 Query 80337 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTA 80396 ||||||||| || | || ||||||||||| ||||| |||||| |||| || | ||| Sbjct 415724 TCCCGCATTGAAAAGTGTGGGAGAAGCGTGGGTAAAAAATTTTTGGGACATCAGGTGGTA 415665 Query 80397 CGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACAT 80456 |||||||| ||| || || ||| |||||||| || || || || ||||| | ||| Sbjct 415664 TGTCTCAATCGCTTTATCAATGTCCTCATGATGAATACCAACGGCAACGCGCATAATCAT 415605 Query 80457 GTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGT 80516 ||||| || | |||| | | ||| || ||| | | | || || | |||| || Sbjct 415604 ATGCTGCGGACGTTCAGCAACTTTGCCGTTGATTCTTAGTAGATACGACCTCTCCAGTGT 415545 Query 80517 TTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 80574 || || ||||| || | ||| ||||| || || || |||| ||| | ||||| || Sbjct 415544 CTTGAACCCAAAGTACTGGTAGTTGAAA--TCACGGTCATAAACGATAGCGGAGTTCAGC 415487 Query 80575 TTATCCTTATATTTGTTAACTACATCCATGGTGATACTTGAAATAATCGGAGAATGTTTC 80634 | || | ||| | || | ||| | | || || || || |||| | | Sbjct 415486 TCTTCGGCGTGTTTCATTACAATATCGTATATTTTTCTGGATATCATGGGAGCAGGGCGG 415427 Query 80635 CCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 80694 || || || || ||||| | | | ||| || || || |||| |||| || Sbjct 415426 TTGTTCTTTGGGTTCACATATCTATAGAGATCTTCGATAACGGACGAAAATTGTTTCTTG 415367 Query 80695 GTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATG 80753 |||| |||||| | || || ||||| ||||| || || | ||||||||||| || || Sbjct 415366 GTTTGCTTGTGCAAGTTGGACACGGCGATTCTAGCAGCAAGGATGGCATAATCAGGGTG 415308 Score = 134 bits (148), Expect = 2e-26 Identities = 706/1113 (63%), Gaps = 23/1113 (2%) Strand=Plus/Minus Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777 ||||||||||| || || || || | | || || ||||||||||| || ||||| | | Sbjct 417403 GTGAATTGAATTGGGGCAGAAGCAGCCATAGTCCGAAGATAGTACATGCCGGTTTTCAAA 417344 Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 78837 || | |||| || |||||||| || || | |||| | || || | | Sbjct 417343 CCTAATTTCCAGCCAGCAAAATGCATGCTAGTAATTTTGCCCATTGTGGGCTCCTTAAGA 417284 Query 78838 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATG 78897 || ||||| | ||||| |||||||||||| || || | ||||||||||| | | Sbjct 417283 TGAATATTGAGGGATTGGGATTGATCGATGAAAGCACCACGATCTGCAGCCATCTGAACA 417224 Query 78898 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 78957 || ||| || | ||||||||| | ||| || |||| || || || || || | Sbjct 417223 ATAGTCCGCTGAGAAATTTCCCATACAGTCTTGTAAAGGGCTTTGATGTCATCGGGGATA 417164 Query 78958 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTC 79014 || | |||| ||||| || |||||||| || || || | ||| || || | ||| | Sbjct 417163 TTGGGAATATTTTGAATTGAGCCACCATCAGCGATGATGCGATTTTTCATGTTGTCAGAC 417104 Query 79015 CATAATTTTCTCTCGGTTAA----AACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 79070 || | | | ||| || | || | || || || ||||| ||||| ||||| Sbjct 417103 CAAAGT----CCAAGGTCAACAAGATCTTTCAGAAGCCATGGGTTAACAACTTGGAATTC 417048 Query 79071 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATT 79130 ||| | | |||| ||||| || ||||| ||| ||||| || | |||| || Sbjct 417047 TCCTGCAAGGACTCGCCGAGAATAGATATTTGAGGTGTATGGCTCAAAGCATTCGTTGAA 416988 Query 79131 TCCCAAAATTTGAGCAGTTGAT-GCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAA 79189 || | ||||| || | | | || || |||||||| || || | | ||| || | | Sbjct 416987 GCCAAGGATTTG-GCTGGTACTAGCAGTGGGCATAGGGGCAACAAGAAGACTGTTGCGTA 416929 Query 79190 GACCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAA 79249 ||||| | | |||| | || ||||| ||||||||||||| ||||| || | Sbjct 416928 CACCGTGTTTTGCTATTTCTTTCTTAAGAGAAACCCAATCCCAAAGGTCAGAAGGTGTTA 416869 Query 79250 CATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCAT 79309 | ||||| | |||||| || | ||| || | | | | || ||| |||||||| | Sbjct 416868 CGTTCCACATATCATACTGCAAAATTCCCTGAGAAACAGGAGAACCTTCATATGTTTCGT 416809 Query 79310 AAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTT 79369 | || ||||| | | | | ||| || || | || | | ||||| || | Sbjct 416808 ATGGGCCTTCGGTCTTTGAAAGTTCGCAGGATGCAGTCAGGGCGGCATGGTAAATTGTCT 416749 Query 79370 CGAAAATCTTCTTATTGAGAT-CTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAG- 79427 | || |||| |||| || | ||| || ||| ||||| || || | |||| Sbjct 416748 CAAAGATCTGAATATTCAGCTGCTTAGCCTGAGAGG-AGTCAAAAGGCAAACGT-AGAGC 416691 Query 79428 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 79487 | || || || || | ||||||||| |||| | | || || | ||| | ||| Sbjct 416690 CAAGAAGGCATCAGCGAGTCCTTGAACCCCAAGAGCAATTGGGCGATGACGGAAGTTACT 416631 Query 79488 AATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGAC 79547 || |||||| |||| || || | || |||| || || || || | ||| | || Sbjct 416630 CTTTCGAGCTTCGGGAACGGGGTAGTGGTTGTTATCAATGATCTTGTTTAAATTGCGCAC 416571 Query 79548 TATTACTTTGACCACATCCTTTAGTTTGAGAAAATC-AAATCGTC-CATCTATTACAAAC 79605 | |||| | || | | | ||| ||| || | ||| | | || ||| Sbjct 416570 CACAACTTGGGTGACTGCGTGCAATTTACCAAAGTCGTACTCGCCGCGGATAGCGTCAAC 416511 Query 79606 --ATGTT--CAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATA 79661 ||||| ||| || | ||||| ||||| || ||||| || |||| | | | ||| Sbjct 416510 GTATGTTGGCAAAGCAAGTGATGCTAGATTGCACACGGCGACTTCATCGGGGGCAGTATA 416451 Query 79662 TTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACT 79721 | || ||||| || || | ||| || |||| ||||| | || | || || || Sbjct 416450 CTCAATAATTTCCGTACATAAATTAGAACTTCTAATAGTTCCAAGGTTCTTCTGGTTGCT 416391 Query 79722 CTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTC 79781 ||| ||||| |||||||| ||||| ||||| ||| | ||||| || | |||| ||| Sbjct 416390 CTTCCGATTACAGGCATCCTTGTAAAGCATGAAAGGATTTCCAGTCTCGGTTTGAGCTTC 416331 Query 79782 TATAATCGCTTTCCAGACGACTCGAGCCTTTAT 79814 | || || | ||||| | ||||||| || Sbjct 416330 CAAGATAGCGTACCAGAGCTTTTGAGCCTTGAT 416298 >seq6 Length=1499889 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/195 (71%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 49974 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 50033 ||| ||||||||||| | | || || |||||||| || || || || ||||| || || Sbjct 78186 GTGAAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTAAGGCCAGGCATGAGACC 78245 Query 50034 ACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGC 50093 |||||| || | ||| || || || ||||| || ||| |||||||| || || || || Sbjct 78246 ACGCTTCTTTAACCAGAAAATAGAAGCAAAAGAACCACTGAAGAAGATACCCTCAACAGC 78305 Query 50094 GGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGTATCCACTTTTGAGC 50150 ||| || |||| ||| | || | || | ||| | || || || ||||| ||| Sbjct 78306 GGCGAAAGCAATAAGACGCTGTGCAAATGTGGATTCACTATCCTGGATCCATCGAATAGC 78365 Query 50151 CCAATCGGCCTTCTT 50165 ||| ||||| ||||| Sbjct 78366 CCAGTCGGCTTTCTT 78380 Score = 84.2 bits (92), Expect = 3e-11 Identities = 218/332 (66%), Gaps = 3/332 (1%) Strand=Plus/Plus Query 50182 GTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATC 50241 || || || |||| |||||||||| | || || ||||| | || || || ||| Sbjct 78451 GTATCGATAGCATCAAAGAGATAGGTACGTTGCTTCGGTTCTTTGATGTATGTGTCAATC 78510 Query 50242 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACAT 50301 | ||| || |||| ||||| |||||||| || ||||||||||| |||||||| Sbjct 78511 AGAAGGGAGTATGTTTCTGAATGGATGTTTTCCATCATGATCTGAAATCCATAGAAACAA 78570 Query 50302 CTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATT 50361 | ||||| | || || ||||| || || || || | | || || || || ||| Sbjct 78571 CGGGCCTCTGGGATTTGGACTTCACCACTGAAGCGCTCCACAAGGTTCTCGTTGACAATT 78630 Query 50362 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTT 50421 |||||| || || || || |||| ||| | | ||| | | |||| | Sbjct 78631 CCGTCAGAAGCGGCGAAGAATGCCAGCACACGAGAGACAAAGTATCGCTCGTCATCATTG 78690 Query 50422 AGT---TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAAT 50478 ||| || ||||| || | | |||||| || | || | || || | ||||| || Sbjct 78691 AGTTTGTTGTTCCAGTCGTGAAGATCTTTGGACAAGTCGATCTCCTCAGCAGTCCAGAAA 78750 Query 50479 GATGCCTCTGCCTTTTTATACATATTCCAGAT 50510 ||||| || ||||| || ||||| | |||||| Sbjct 78751 GATGCTTCAGCCTTCTTGTACATTTGCCAGAT 78782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268449843960