Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq9 122 7e-23 >seq9 Length=1275601 Score = 122 bits (134), Expect = 7e-23 Identities = 178/248 (72%), Gaps = 3/248 (1%) Strand=Plus/Minus Query 42863 ATATACATATCCAATCGTCGCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCT 42922 ||||||| || | | || |||||||||| ||| || ||||| || | ||||||||| | Sbjct 1015891 ATATACAGATGCC-TAGTTTCCTCCACGCAATCTCAAAACCAAGTGCAGAGTGCTCTCTT 1015833 Query 42923 TTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCA 42982 | || | |||||| || || | ||||| | || || | ||| ||||||||||| || | Sbjct 1015832 TCTGGATATTGTAGTCTGAAAGCGTACGGCCATCTTCAAGTTGCTTGCCGGCAAAGATGA 1015773 Query 42983 ATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCT-TTGACTCTGCCA 43041 |||||||| |||| || | |||||| || || |||| | | ||||| || || Sbjct 1015772 GGCGCTGTTGGTCGGGTGGAATACCTTCCTTATC-CTGAATTTTTGTCTTGACATTGTCA 1015714 Query 43042 ACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAA 43101 | ||||| || || || |||| || || || || ||||| || ||||| |||||| Sbjct 1015713 ATCGTGTCCGAAGATTCAACTTCTAATGTGATGGTCTTGCCGGTAAGTGTTTTGACAAAA 1015654 Query 43102 ATTTGCAT 43109 || ||||| Sbjct 1015653 ATCTGCAT 1015646 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 ||| ||||| | |||||||| |||| ||| || |||| || | |||||| ||||| || Sbjct 1015609 CTCTTTTTGGATGTTGTAATCAGACAGTGTGCGGCCGTCCTCGAGTTGTTTACCGGCGAA 1015550 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037 || | || || || || | || | ||||||||| || ||| |||||| | Sbjct 1015549 GATTAGGCGTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGAATCTTTGTTTTGACGTT 1015490 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 | | | || || || ||| || |||| || || ||||||||||||| ||||| || Sbjct 1015489 GTCGATCGTATCAGAAGACTCAACTTCTAATGTGATTGTTTTTCCGGTTAAGGTTTTTAC 1015430 Query 43098 AAAAATTTGCAT 43109 ||||||||||| Sbjct 1015429 GAAAATTTGCAT 1015418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381369418730262