Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq6 131 2e-25 >seq6 Length=1499889 Score = 131 bits (144), Expect = 2e-25 Identities = 316/464 (68%), Gaps = 31/464 (7%) Strand=Plus/Minus Query 125433 GCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTC 125492 || |||||||| || ||||| |||||||| ||| |||||| | || || ||| | Sbjct 78314 GCTTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGGTTCTTTTGCTTCTATTTTCTGGTTA 78255 Query 125493 AAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAG 125552 |||||||| || |||||||| || || || | |||||| | || ||||| |||||| Sbjct 78254 AAGAAGCGTGGTCTCATGCCTGGCCTTACTTTCTCCAACGAGCTGATCTCTCGTGACGAG 78195 Query 125553 GGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTAT--CTGCGTCCCGAGTGC 125609 || || ||| ||||||||| || || || || || || | |||||| || | Sbjct 78194 GGTCTTCACACTGACTTTGCTTGCCTCCTCTTCTCTCACCTCCGCCACCGTCCC-AGCCC 78136 Query 125610 AGATCCAGC-GATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGA 125668 ||| ||| | || | | |||| ||||| | |||||| || || ||||| Sbjct 78135 AGA---AGCTGTTGCA---GCAATCATCATTGAA------GCCGTGGAAATCGAGCAAGA 78088 Query 125669 GTTTCTAACCGAATCCCTACCGGTCAGCA-TGATTGGCATGAACTGCAAGCTAATGTGCG 125727 || |||| || | || || | || | |||||||||||| |||| | |||||| Sbjct 78087 ATTCTTAACGGATGCTCTTCCA-TGTGCTCTCCTTGGCATGAACTCCAAGTTGATGTGCC 78029 Query 125728 AGTACATAGAGTTTGTGGCAGATCGTCTACT-GTACGAGTTGATTGGCCGCAAGAT---T 125783 | ||||| ||||| || || || || |||| ||| | | ||||| ||||| | Sbjct 78028 AATACATCGAGTTCGTAGCCGACCGGTTACTTGTA---GCTC-TTGGCAACAAGAAACAT 77973 Query 125784 TACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAAC 125843 || ||| ||| ||| || || || |||||| | ||| || || | || ||||||||| Sbjct 77972 TATAACTCCACGAACCCATTCGACTTCATGGATAACATCTCGCTTGCCGGCAAGACCAAC 77913 Query 125844 TTTTTCGAGAAGAAGGTCAGCGAGTAC--AAACGCTACGGTGTC 125885 ||||| |||||| || |||| ||| ||| ||| |||||| Sbjct 77912 TTTTTTGAGAAGCGTGTTGGCGATTACCAAAAAGCT--GGTGTC 77871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058838733640