Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_005038.1
Length=99657
Score E
Sequences producing significant alignments: (Bits) Value
seq9 95.1 8e-15
>seq9
Length=1275601
Score = 95.1 bits (104), Expect = 8e-15
Identities = 154/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 33152 AACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGT 33211
|||||||| || | || | || ||||||||||| || ||||||||||||| || |
Sbjct 1015635 AACCGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGACAGTGTGCGG 1015576
Query 33212 TGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCT 33271
||| || | ||| || || || |||| ||||||||||| | || || ||||||
Sbjct 1015575 CCGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGGATACCTTCT 1015516
Query 33272 TTTTCGCTAATCGCCTGTTTT-ACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGT 33330
|| || |||| |||||| || | | ||||| || | | ||| || | ||
Sbjct 1015515 TTATCTTGAATC-TTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCAACTTCTAATGT 1015457
Query 33331 TATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369
|| |||||||| || | ||||||||||||||||||||
Sbjct 1015456 GATTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCAT 1015418
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 318777448481022
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |