Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq9 89.7 4e-13
>seq9
Length=1275601
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 43930 CTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAA 43989
||||||||| || || ||||| | | || | || || | |||||| || || ||
Sbjct 1015609 CTCTTTTTGGATGTTGTAATCAGACAGTGTGCGGCCGTCCTCGAGTTGTTTACCGGCGAA 1015550
Query 43990 TATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTTTGTTTGACCAT 44049
|| | ||||||||||| | || | ||||||||||||| ||| ||| |||||| |
Sbjct 1015549 GATTAGGCGTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGAATCTTTGTTTTGACGTT 1015490
Query 44050 AGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCAC 44109
| | ||||| | | ||| || || | || |||||||| |||||||| || || ||
Sbjct 1015489 GTCGATCGTATCAGAAGACTCAACTTCTAATGTGATTGTTTTTCCGGTTAAGGTTTTTAC 1015430
Query 44110 AAATATTTGCAT 44121
|| ||||||||
Sbjct 1015429 GAAAATTTGCAT 1015418
Score = 87.8 bits (96), Expect = 1e-12
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954
||||| | |||||| || ||||| || || ||||||||||| || ||||| || || |
Sbjct 1015872 CCTCCACGCAATCTCAAAACCAAGTGCAGAGTGCTCTCTTTCTGGATATTGTAGTC-TGA 1015814
Query 43955 AATTG-ACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|| | ||| |||| || | ||| || || ||||| || | || || ||||| | ||
Sbjct 1015813 AAGCGTACGGCCATCTTCAAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGG 1015754
Query 44014 TACACCTTCTTTAT-CTGAAATTTTTTGT-TTGACCATAGCAACAGTATCTGCCGGCTCC 44071
| |||||| |||| ||||| ||||||| ||||| | ||| || || | | ||
Sbjct 1015753 AATACCTTCCTTATCCTGAA--TTTTTGTCTTGACATTGTCAATCGTGTCCGAAGATTCA 1015696
Query 44072 ACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| || | || || || || ||||| | || || ||||| || |||||
Sbjct 1015695 ACTTCTAATGTGATGGTCTTGCCGGTAAGTGTTTTGACAAAAATCTGCAT 1015646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354777431369772
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |