Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq9 109 5e-19
seq5 84.2 2e-11
>seq9
Length=1275601
Score = 109 bits (120), Expect = 5e-19
Identities = 168/240 (70%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| | | || || || | ||| ||||| || | ||| | ||||| || ||||| |
Sbjct 1015657 AAAAATCTGCATACCACCGCGCAACCGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGAT 1015598
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
||| ||||| || ||| | ||||| || ||||| ||| | ||||||| | |||
Sbjct 1015597 GTTGTAATCAGACAGTGTGCGGCCGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTG 1015538
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
||| ||||| || ||||||||||| || | ||| |||| |||||| | ||| || ||
Sbjct 1015537 CTGGTCTGGTGGGATACCTTCTTTATCTTGAATCTTTGTTTTGACGTTGTCGATCGTATC 1015478
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || | ||||| |||||||| || | ||||| || || || |||||
Sbjct 1015477 AGAAGACTCAACTTCTAATGTGATTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCAT 1015418
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 94780 TCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCT 94839
|||||| | ||||| ||| |||||||||| ||| || || || | || || || |
Sbjct 1015873 TCCTCCACGCAATCTCAAAACCAAGTGCAGAGTGCTCTCTTTCTGGATATTGTAGTC--T 1015816
Query 94840 CATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGA 94897
| || || | ||| || || || || ||| ||||||| | | || || || ||
Sbjct 1015815 GAAAGCGTACGGCCATCTTCAAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGT 1015756
Query 94898 GGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCG 94957
||||||||||| || || | |||||||| |||||| | | | ||||| | ||
Sbjct 1015755 GGAATACCTTCCTTATCCTGAATTTTTGTCTTGACATTGTCAATCGTGTCCGAAGATTCA 1015696
Query 94958 ACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || | |||||||| || || ||||| ||||| ||||| ||||||||
Sbjct 1015695 ACTTCTAATGTGATGGTCTTGCCGGTAAGTGTTTTGACAAAAATCTGCAT 1015646
>seq5
Length=1732373
Score = 84.2 bits (92), Expect = 2e-11
Identities = 130/183 (71%), Gaps = 2/183 (1%)
Strand=Plus/Plus
Query 94818 CCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGA 94877
||||||| | ||||||||||||| |||| |||||| ||||| |||||| | || |
Sbjct 840092 CCTTTTGGATATTATAATCGCTCAAAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAAA 840151
Query 94878 TTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGC 94937
| |||| || || ||||| |||||||| || ||||| | ||| || ||||||
Sbjct 840152 TCAATCGCTGTTGGTCTGGCGGAATACCCTCCTTGTCCTGAATCTTGCTCTTGACATTAT 840211
Query 94938 CGACAGTGTCAGCGTG-GTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACA 94996
| | || || || | ||||| |||| |||||||| || || || || || || ||
Sbjct 840212 CAATTGTATC-GCTCGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTAACG 840270
Query 94997 AAG 94999
|||
Sbjct 840271 AAG 840273
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448290981458040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |