Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq9 109 5e-19 seq5 84.2 2e-11 >seq9 Length=1275601 Score = 109 bits (120), Expect = 5e-19 Identities = 168/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || || || | ||| ||||| || | ||| | ||||| || ||||| | Sbjct 1015657 AAAAATCTGCATACCACCGCGCAACCGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGAT 1015598 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| ||||| || ||| | ||||| || ||||| ||| | ||||||| | ||| Sbjct 1015597 GTTGTAATCAGACAGTGTGCGGCCGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTG 1015538 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||| ||||| || ||||||||||| || | ||| |||| |||||| | ||| || || Sbjct 1015537 CTGGTCTGGTGGGATACCTTCTTTATCTTGAATCTTTGTTTTGACGTTGTCGATCGTATC 1015478 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || | ||||| |||||||| || | ||||| || || || ||||| Sbjct 1015477 AGAAGACTCAACTTCTAATGTGATTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCAT 1015418 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 94780 TCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCT 94839 |||||| | ||||| ||| |||||||||| ||| || || || | || || || | Sbjct 1015873 TCCTCCACGCAATCTCAAAACCAAGTGCAGAGTGCTCTCTTTCTGGATATTGTAGTC--T 1015816 Query 94840 CATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGA 94897 | || || | ||| || || || || ||| ||||||| | | || || || || Sbjct 1015815 GAAAGCGTACGGCCATCTTCAAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGT 1015756 Query 94898 GGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCG 94957 ||||||||||| || || | |||||||| |||||| | | | ||||| | || Sbjct 1015755 GGAATACCTTCCTTATCCTGAATTTTTGTCTTGACATTGTCAATCGTGTCCGAAGATTCA 1015696 Query 94958 ACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | |||||||| || || ||||| ||||| ||||| |||||||| Sbjct 1015695 ACTTCTAATGTGATGGTCTTGCCGGTAAGTGTTTTGACAAAAATCTGCAT 1015646 >seq5 Length=1732373 Score = 84.2 bits (92), Expect = 2e-11 Identities = 130/183 (71%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 94818 CCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGA 94877 ||||||| | ||||||||||||| |||| |||||| ||||| |||||| | || | Sbjct 840092 CCTTTTGGATATTATAATCGCTCAAAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAAA 840151 Query 94878 TTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGC 94937 | |||| || || ||||| |||||||| || ||||| | ||| || |||||| Sbjct 840152 TCAATCGCTGTTGGTCTGGCGGAATACCCTCCTTGTCCTGAATCTTGCTCTTGACATTAT 840211 Query 94938 CGACAGTGTCAGCGTG-GTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACA 94996 | | || || || | ||||| |||| |||||||| || || || || || || || Sbjct 840212 CAATTGTATC-GCTCGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTAACG 840270 Query 94997 AAG 94999 ||| Sbjct 840271 AAG 840273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290981458040