Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq9 100 3e-16 seq6 100 3e-16 >seq9 Length=1275601 Score = 100 bits (110), Expect = 3e-16 Identities = 151/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || |||||||| ||||| |||||| | ||||| | ||| | || || Sbjct 1015418 ATGCAAATTTTCGTAAAAACCTTAACCGGAAAAACAATCACATTAGAAGTTGAGTCTTCT 1015477 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || ||||| | |||||| ||||||| || |||||||| || || || || || Sbjct 1015478 GATACGATCGACAACGTCAAAACAAAGATTCAAGATAAAGAAGGTATCCCACCAGACCAG 1015537 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG-AAAC-GTCAGCGACTATA 26946 ||| | || || | || ||| ||||||||||| || | | | || ||| || || | Sbjct 1015538 CAACGCCTAATCTTCGCCGGTAAACAACTCGAGGACGGCCGCACACTGTC--TGATTACA 1015595 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGT 26977 |||| |||||||| ||||| |||| || || Sbjct 1015596 ACATCCAAAAAGAGTCTACCCTCCACCTTGT 1015626 >seq6 Length=1499889 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 8/229 (3%) Strand=Plus/Plus Query 119645 GTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATTCAT 119704 ||| ||||| ||||| || |||||||| || |||||||| |||| || ||||||| ||| Sbjct 77886 GTAATCGCCAACACGCTTCTCAAAAAAGTTGGTCTTGCCGGCAAGCGAGATGTTATCCAT 77945 Query 119705 AAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACA-GT- 119762 || ||||| || || | | ||| |||| || | || ||| | || | ||| || Sbjct 77946 GAAGTCGAATGGGTTCGTGGAGTTATAATGTTTCTTGTTGCCAA----GAGCTACAAGTA 78001 Query 119763 --CGATCTGCCACAAACTCGATGTATTCGCACATGGATTGCGAATTCATGCCCAACATAG 119820 || || || || ||||||||||||| |||||| | | || |||||||| | | || Sbjct 78002 ACCGGTCGGCTACGAACTCGATGTATTGGCACATCAACTTGGAGTTCATGCCAAGGAGAG 78061 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTC 119869 | || | ||||| || ||||| || | || || || || ||||| Sbjct 78062 CACATGGAAGAGCATCCGTTAAGAATTCTTGCTCGATTTCCACGGCTTC 78110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662166652080