Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq7 233 5e-56
>seq7
Length=1353353
Score = 233 bits (258), Expect = 5e-56
Identities = 465/682 (68%), Gaps = 10/682 (1%)
Strand=Plus/Plus
Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459
||||| |||||| || || ||| | ||||| || | ||| |||||| ||||||
Sbjct 415542 AAGACACTGGAGAGGTCGTATCTACTAAGAATCAACGGCAAAGTTGCTGAACGTCCGCAG 415601
Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAA 363519
|||||| | ||||| ||||| ||||||| ||| ||| ||||| ||||||||
Sbjct 415602 CATATGATTATGCGCGTTGCCGTTGGTATTCATCATGAGGACATTGATAAAGCGATTGAG 415661
Query 363520 ACATATAAGCTTCTAAGTGCTCGTG--TATTCACGCACGCCACGCCAACAATGTACAATG 363577
||||| | || | || | | || || ||||| | || ||| | | |||||
Sbjct 415662 ACATACCACCTGAT--GTCCCAAAAATTTTTTACCCACGCTTCTCCCACACTTTTCAATG 415719
Query 363578 CTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCA 363637
| ||||| | | | ||||||||| |||| ||||| ||| | | |||||||| ||| |
Sbjct 415720 CGGGAACACCTCAACCACAGATGGCTTCCTGCTTCCTTATTGATATGAAGGAGGATAGTA 415779
Query 363638 TCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAA 363697
| ||||| |||| ||| ||||| |||| |||||||| |||||||||| ||| || || |
Sbjct 415780 TTGAGGGGATCTATGATACACTGAAGACATGTGCTCTGATTTCCAAGACTGCTGGGGGTA 415839
Query 363698 TTGGTGT-ATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCACAGGGGGA 363756
|||| | | || || | | | |||||| | |||||| || ||| ||
Sbjct 415840 TTGGACTCAACGTTCACCGAA-TCCGTGCAACTGGCTCCTACATTGCAGGAACAAATGGC 415898
Query 363757 TACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGAC 363816
| ||| |||||| | |||||||||||||||| ||| |||||||||| || || || ||
Sbjct 415899 TCCTCTAATGGGATCATTCCCATGCTTCGTGTCTTTAACAATACTGCCAGATATGTGGAT 415958
Query 363817 CAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGAT 363876
||||| || || ||| || || |||||||| ||||| || ||| || | ||
Sbjct 415959 CAGGGCGGCAATAAACGCCCTGGTGCTTTTGCTATTTATCTTGAACCTTGGCACTCTGAC 416018
Query 363877 ATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGAT 363936
| ||||||||| | || ||||| ||||| || ||||| ||| || | || || |||
Sbjct 416019 GTATTTGAGTTTTTGGACCTCCGTAAAAATCATGGTAAAGAAGAAGTGAGAGCCCGAGAT 416078
Query 363937 CTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAG--A 363994
|| ||| || || ||| | | ||| || ||||| || || ||| | | | |
Sbjct 416079 CTTTTCCTCGCCCTCTGGACTCCCGACTTGTTCATGAAACGGGTTGAG--AAGAATGGCG 416136
Query 363995 ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACT 364054
||||| |||| || || ||| |||| | || || ||||||| | || ||||| |
Sbjct 416137 ATTGGACACTATTCTGTCCAAACGAGGCATCTGGACTCGCCGATGTCTACGGAGACGAAT 416196
Query 364055 ATGTTGCTCTATACGAAAAGTA 364076
| ||||||||| ||||
Sbjct 416197 TCGAGCAGCTATACGAACAGTA 416218
Score = 174 bits (192), Expect = 4e-38
Identities = 628/966 (65%), Gaps = 30/966 (3%)
Strand=Plus/Plus
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| || ||||| |||| || ||| |||| | || | ||||| |||| || | |||
Sbjct 416304 GCTCAAAAGCTCTGGTACGCTATCTTGGAAGCTCAAACCGAGACTGGAAATCCTTTCATG 416363
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
| ||||| ||| | || || || ||| ||||||| || ||||||| || ||| || ||
Sbjct 416364 CTTTACAAGGATGCCTGTAATCGGAAGAGCAACCAGAAGAACCTTGGAACTATT-AGAAG 416422
Query 364231 AGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAA 364289
| || ||||||| || |||||||| || || || ||||| || ||||| || ||
Sbjct 416423 TTCTAATTTATGTACGGAAATTATTGAGTATACTGCCCCCGATGAAGTCGCCGTGTGCAA 416482
Query 364290 CCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTACTTTTGACCACCAGCATCT 364349
|| || || | || | || | | || || | || | | | | | |
Sbjct 416483 TCTAGCATCACTTGCTTTGCCAACATACGTT---GACGCTATCCGCGGCGAGTACGACTT 416539
Query 364350 T--TA---TG-ACGTA---ACCTA--TCATGCTACTTGCAATCTCGACAAGGTTATCGAC 364398
| || || ||| | ||| | | || | | ||||| | ||||| | || ||
Sbjct 416540 TGGTAAATTGCACGCAGTCACCCAAGTTGTGGTGC--GCAATTTAAACAAGATCATTGAT 416597
Query 364399 AAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCCCGATTGG 364457
|| || | || || |||| ||||| ||| | ||| | ||||||||||| ||||
Sbjct 416598 AACAACCACTACCCCGTTCCCGAAGCTCGAAAGAG-TAACTTCCGTCATCGCCCAATTGC 416656
Query 364458 TCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAA--GATGGCATTTGATTCG 364515
|||||| || || || |||||||| | || || |||| | || | ||||| ||
Sbjct 416657 TCTTGGGGTTCAAGGACTCGCTGATGCCTTCTTG--GCTCTACGTTTGCCTTTTGACTCC 416714
Query 364516 CCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACT 364575
|| | ||| || |||| |||||||||| ||||| || |||||| |||||
Sbjct 416715 TCTCAGGCTAAGCAGCTGAATATTCAGATCTTTGAGACAATTTACCATGCCGCCCTGACT 416774
Query 364576 GCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTT 364635
|| || || || | |||| ||| | || ||| || ||||| || || ||| ||
Sbjct 416775 GCATCCTGCGAACTTTCAAAGACCGAAGGCCCATACGAAACATATGAAGGTTCTCCTGTT 416834
Query 364636 TCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGG 364695
|| ||||||| || |||| |||| | ||||| || || || |||| || ||| | |||
Sbjct 416835 TCTCAGGGAATTTTGCAGTATGATATGTGGAACGTAACACCTTCTGACCTTTGGGATTGG 416894
Query 364696 GATACGCTACGTTCCAACGTTA-AG--AAGCATGGTACTCGCAACTCCCTCGTTACAGCG 364752
| | | || | || | | || || || ||| |||||| || || ||
Sbjct 416895 GTTTCTCT---TAAGAAAGAAATAGCAAAACACGGTGTACGCAACAGTCTTCTTGTTGCC 416951
Query 364753 CCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTT 364812
|| |||||||| ||| ||| || ||||| || |||||| ||||| || || |
Sbjct 416952 CCTATGCCCACTGCTAGTACCAGCCAAATCCTTGGCTTCAACGAATGCTTTGAGCCATAC 417011
Query 364813 ACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTAC 364872
|| ||| | ||||| || || || ||| | |||||||| | || ||||| |
Sbjct 417012 ACCTCAAATATCTATTCTCGGCGAGTCCTTGCAGGAGAATTCCAAGTTGTTAACCCATGG 417071
Query 364873 CTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATC 364932
|| | || |||||| |||| || || ||| ||||| |||||| || ||||||
Sbjct 417072 CTTCTGAAAGATCTTGTTGACCTTGGACTTTGGTCTGACAACATGAAAAATCGCATCATC 417131
Query 364933 GCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTAC 364992
|| | | ||| || | || || ||||| | || || || | || | |||||
Sbjct 417132 GCTGATGGTGGCTCAATTCAAAATATTCCCAATATCCCCGATGACATCAAAGCCCTTTAC 417191
Query 364993 AAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCT 365052
|| || |||||||||||||| ||| ||| | || | ||||| || ||||| ||||||
Sbjct 417192 AAGACTGTATGGGAAATTTCTCAGCGGACTATTGTTCAGATGGCTGCAGATCGTGGTGCT 417251
Query 365053 TTTATC 365058
|| |||
Sbjct 417252 TTCATC 417257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303352948730498
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |