Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq7 233 5e-56 >seq7 Length=1353353 Score = 233 bits (258), Expect = 5e-56 Identities = 465/682 (68%), Gaps = 10/682 (1%) Strand=Plus/Plus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459 ||||| |||||| || || ||| | ||||| || | ||| |||||| |||||| Sbjct 415542 AAGACACTGGAGAGGTCGTATCTACTAAGAATCAACGGCAAAGTTGCTGAACGTCCGCAG 415601 Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAA 363519 |||||| | ||||| ||||| ||||||| ||| ||| ||||| |||||||| Sbjct 415602 CATATGATTATGCGCGTTGCCGTTGGTATTCATCATGAGGACATTGATAAAGCGATTGAG 415661 Query 363520 ACATATAAGCTTCTAAGTGCTCGTG--TATTCACGCACGCCACGCCAACAATGTACAATG 363577 ||||| | || | || | | || || ||||| | || ||| | | ||||| Sbjct 415662 ACATACCACCTGAT--GTCCCAAAAATTTTTTACCCACGCTTCTCCCACACTTTTCAATG 415719 Query 363578 CTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCA 363637 | ||||| | | | ||||||||| |||| ||||| ||| | | |||||||| ||| | Sbjct 415720 CGGGAACACCTCAACCACAGATGGCTTCCTGCTTCCTTATTGATATGAAGGAGGATAGTA 415779 Query 363638 TCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAA 363697 | ||||| |||| ||| ||||| |||| |||||||| |||||||||| ||| || || | Sbjct 415780 TTGAGGGGATCTATGATACACTGAAGACATGTGCTCTGATTTCCAAGACTGCTGGGGGTA 415839 Query 363698 TTGGTGT-ATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCACAGGGGGA 363756 |||| | | || || | | | |||||| | |||||| || ||| || Sbjct 415840 TTGGACTCAACGTTCACCGAA-TCCGTGCAACTGGCTCCTACATTGCAGGAACAAATGGC 415898 Query 363757 TACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGAC 363816 | ||| |||||| | |||||||||||||||| ||| |||||||||| || || || || Sbjct 415899 TCCTCTAATGGGATCATTCCCATGCTTCGTGTCTTTAACAATACTGCCAGATATGTGGAT 415958 Query 363817 CAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGAT 363876 ||||| || || ||| || || |||||||| ||||| || ||| || | || Sbjct 415959 CAGGGCGGCAATAAACGCCCTGGTGCTTTTGCTATTTATCTTGAACCTTGGCACTCTGAC 416018 Query 363877 ATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGAT 363936 | ||||||||| | || ||||| ||||| || ||||| ||| || | || || ||| Sbjct 416019 GTATTTGAGTTTTTGGACCTCCGTAAAAATCATGGTAAAGAAGAAGTGAGAGCCCGAGAT 416078 Query 363937 CTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAG--A 363994 || ||| || || ||| | | ||| || ||||| || || ||| | | | | Sbjct 416079 CTTTTCCTCGCCCTCTGGACTCCCGACTTGTTCATGAAACGGGTTGAG--AAGAATGGCG 416136 Query 363995 ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACT 364054 ||||| |||| || || ||| |||| | || || ||||||| | || ||||| | Sbjct 416137 ATTGGACACTATTCTGTCCAAACGAGGCATCTGGACTCGCCGATGTCTACGGAGACGAAT 416196 Query 364055 ATGTTGCTCTATACGAAAAGTA 364076 | ||||||||| |||| Sbjct 416197 TCGAGCAGCTATACGAACAGTA 416218 Score = 174 bits (192), Expect = 4e-38 Identities = 628/966 (65%), Gaps = 30/966 (3%) Strand=Plus/Plus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || || ||||| |||| || ||| |||| | || | ||||| |||| || | ||| Sbjct 416304 GCTCAAAAGCTCTGGTACGCTATCTTGGAAGCTCAAACCGAGACTGGAAATCCTTTCATG 416363 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 | ||||| ||| | || || || ||| ||||||| || ||||||| || ||| || || Sbjct 416364 CTTTACAAGGATGCCTGTAATCGGAAGAGCAACCAGAAGAACCTTGGAACTATT-AGAAG 416422 Query 364231 AGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAA 364289 | || ||||||| || |||||||| || || || ||||| || ||||| || || Sbjct 416423 TTCTAATTTATGTACGGAAATTATTGAGTATACTGCCCCCGATGAAGTCGCCGTGTGCAA 416482 Query 364290 CCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTACTTTTGACCACCAGCATCT 364349 || || || | || | || | | || || | || | | | | | | Sbjct 416483 TCTAGCATCACTTGCTTTGCCAACATACGTT---GACGCTATCCGCGGCGAGTACGACTT 416539 Query 364350 T--TA---TG-ACGTA---ACCTA--TCATGCTACTTGCAATCTCGACAAGGTTATCGAC 364398 | || || ||| | ||| | | || | | ||||| | ||||| | || || Sbjct 416540 TGGTAAATTGCACGCAGTCACCCAAGTTGTGGTGC--GCAATTTAAACAAGATCATTGAT 416597 Query 364399 AAGAATTATTATCCAATTCCTGAAGC-CGAGCGTTCTAATATGCGTCATCGCCCGATTGG 364457 || || | || || |||| ||||| ||| | ||| | ||||||||||| |||| Sbjct 416598 AACAACCACTACCCCGTTCCCGAAGCTCGAAAGAG-TAACTTCCGTCATCGCCCAATTGC 416656 Query 364458 TCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAA--GATGGCATTTGATTCG 364515 |||||| || || || |||||||| | || || |||| | || | ||||| || Sbjct 416657 TCTTGGGGTTCAAGGACTCGCTGATGCCTTCTTG--GCTCTACGTTTGCCTTTTGACTCC 416714 Query 364516 CCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACT 364575 || | ||| || |||| |||||||||| ||||| || |||||| ||||| Sbjct 416715 TCTCAGGCTAAGCAGCTGAATATTCAGATCTTTGAGACAATTTACCATGCCGCCCTGACT 416774 Query 364576 GCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTT 364635 || || || || | |||| ||| | || ||| || ||||| || || ||| || Sbjct 416775 GCATCCTGCGAACTTTCAAAGACCGAAGGCCCATACGAAACATATGAAGGTTCTCCTGTT 416834 Query 364636 TCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGG 364695 || ||||||| || |||| |||| | ||||| || || || |||| || ||| | ||| Sbjct 416835 TCTCAGGGAATTTTGCAGTATGATATGTGGAACGTAACACCTTCTGACCTTTGGGATTGG 416894 Query 364696 GATACGCTACGTTCCAACGTTA-AG--AAGCATGGTACTCGCAACTCCCTCGTTACAGCG 364752 | | | || | || | | || || || ||| |||||| || || || Sbjct 416895 GTTTCTCT---TAAGAAAGAAATAGCAAAACACGGTGTACGCAACAGTCTTCTTGTTGCC 416951 Query 364753 CCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTT 364812 || |||||||| ||| ||| || ||||| || |||||| ||||| || || | Sbjct 416952 CCTATGCCCACTGCTAGTACCAGCCAAATCCTTGGCTTCAACGAATGCTTTGAGCCATAC 417011 Query 364813 ACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTAC 364872 || ||| | ||||| || || || ||| | |||||||| | || ||||| | Sbjct 417012 ACCTCAAATATCTATTCTCGGCGAGTCCTTGCAGGAGAATTCCAAGTTGTTAACCCATGG 417071 Query 364873 CTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATC 364932 || | || |||||| |||| || || ||| ||||| |||||| || |||||| Sbjct 417072 CTTCTGAAAGATCTTGTTGACCTTGGACTTTGGTCTGACAACATGAAAAATCGCATCATC 417131 Query 364933 GCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTAC 364992 || | | ||| || | || || ||||| | || || || | || | ||||| Sbjct 417132 GCTGATGGTGGCTCAATTCAAAATATTCCCAATATCCCCGATGACATCAAAGCCCTTTAC 417191 Query 364993 AAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCT 365052 || || |||||||||||||| ||| ||| | || | ||||| || ||||| |||||| Sbjct 417192 AAGACTGTATGGGAAATTTCTCAGCGGACTATTGTTCAGATGGCTGCAGATCGTGGTGCT 417251 Query 365053 TTTATC 365058 || ||| Sbjct 417252 TTCATC 417257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352948730498