Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq9 89.7 4e-13
>seq9
Length=1275601
Score = 89.7 bits (98), Expect = 4e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||||||||| || ||||| | || |||||||| || || | ||| |||||
Sbjct 1015418 ATGCAAATTTTCGTAAAAACCTTAACCGGAAAAACAATCACATTAGAAGTTGAGTCTTCT 1015477
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
|| || | | ||||| || ||| ||| ||| ||||||||||| |||| || ||
Sbjct 1015478 GATAC-GATCGACAACGTCAAAACAAAGATTCAAGATAAAGAAGGTATCCCACCAGACCA 1015536
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
|||| | || || | || || |||||| | || || | | || || | ||||| ||
Sbjct 1015537 GCAACGCCTAATCTTCGCCGGTAAACAACTCGAGGACGGCCGCACACTGTCTGATTACAA 1015596
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||| |||||||||||||| | || | || ||| | ||||| || ||
Sbjct 1015597 CATCCAAAAAGAGTCTACCCTCCACCTTGTTTTGCGGTTGCGCGGTGG 1015644
Score = 86.0 bits (94), Expect = 5e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| |||||||||||||| || || || || ||||| || | ||| || ||
Sbjct 1015646 ATGCAGATTTTTGTCAAAACACTTACCGGCAAGACCATCACATTAGAAGTTGAATCTTCG 1015705
Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
||||| | | ||||| || || ||||||| ||||| ||||| | || || ||
Sbjct 1015706 GACAC-GATTGACAATGTCAAGACAAAAATTCAGGATAAGGAAGGTATTCCACCCGACCA 1015764
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
|| | || || | ||| ||||| ||| | ||||||| | || | | || || ||
Sbjct 1015765 ACAGCGCCTCATCTTTGCCGGCAAGCAACTTGAAGATGGCCGTACGCTTTCAGACTACAA 1015824
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515
|| || |||||| ||| | || |||| ||||||||||| ||||||||
Sbjct 1015825 TATCCAGAAAGAGAGCACTCTGCACTTGGTTTTGAGATTGCGTGGAGGAAA 1015875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425343797828680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |