Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq9 125 7e-24
seq6 123 2e-23
>seq9
Length=1275601
Score = 125 bits (138), Expect = 7e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||||||||| |||| || | || | ||| ||||| ||||| ||||||||||| |
Sbjct 1015644 CCACCGCGCAACCGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGAC 1015585
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| || || || || ||| |||||| || |||||||| || |||
Sbjct 1015584 AGTGTGCGGCCGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGG 1015525
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| |||||||| || ||| | | || |||| | || | ||||| | ||||| |
Sbjct 1015524 ATACCTTCTTTATC-TTGAATCTTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCAAC 1015466
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||||| ||||||| |||||||||||||| |||||
Sbjct 1015465 TTCTAATGTGATTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCAT 1015418
Score = 100 bits (110), Expect = 3e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||| || || | || | || |||||||| ||||||||||||||
Sbjct 1015416 CCACCGCGAAGACGAAGGACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAATCCGAG 1015357
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| || || || || ||| |||| || || |||||||| || |||
Sbjct 1015356 AGGGTGCGACCATCCTCGAGTTGTTTACCAGCGAAGATCAATCGTTGCTGGTCGGGGGGG 1015297
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||||||||| ||| || || | | || | ||||| | |||||||
Sbjct 1015296 ATGCCTTCTTTGTCCTGGATCTTGGTTTTCACATTGTCGATGGTATCAGAAGACTCGACC 1015237
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222
|| | ||||| || || || || ||||| || ||
Sbjct 1015236 TCAAGGGTAATAGTCTTGCCAGTAAGAGTCTTGAC 1015202
>seq6
Length=1499889
Score = 123 bits (136), Expect = 2e-23
Identities = 341/514 (66%), Gaps = 13/514 (3%)
Strand=Plus/Minus
Query 46087 CCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACT 46146
|| ||| | ||||||||| |||||||||| || |||||| | || | ||
Sbjct 78392 CCTTGCATTCGCAAGAAAGCCGACTGGGCTATTCGATGGATCCAGGATAGTGAATCCACA 78333
Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206
|| || ||||| | | || || || ||| ||||| |||| || ||| ||||
Sbjct 78332 TTTGCACAGCGTCTTATTGCTTTCGCCGCTGTTGAGGGTATCTTCTTCAGTGGTTCTTTT 78273
Query 46207 GCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGA 46265
|| | || || | | || || | || | ||||||| ||||| || || ||||||
Sbjct 78272 GCTTCTATTTTCTGGTTAAAGAAGCGTGGTC-TCATGCCTGGCCTTACTTTCTCCAACGA 78214
Query 46266 GCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCG 46325
|||||| || || |||||||| || || || |||||||| || ||| || | |||
Sbjct 78213 GCTGATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCTTGCCTCCTCTT---CTCTCA 78157
Query 46326 CGTGCACGACAAGCTTGC--GCCCGACACCGTGCTG-AGCA-TGTTCAAGGAGGCGGTGG 46381
| | | | || | | | |||| | | || || |||| | ||| || || ||||
Sbjct 78156 CCTCCGCCAC---CGTCCCAGCCCAGAAGC-TGTTGCAGCAATCATCATTGAAGCCGTGG 78101
Query 46382 CCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCAC 46441
|| ||| | || || || |||| || || || ||| || || ||||||||| |
Sbjct 78100 AAATCGAGCAAGAATTCTTAACGGATGCTCTTCCATGTGCTCTCCTTGGCATGAACTCCA 78041
Query 46442 AGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGC 46501
||| |||||| | ||||||||||| ||||| ||||| | || || ||| | |
Sbjct 78040 AGTTGATGTGCCAATACATCGAGTTCGTAGCCGACCGGTTACTTGTAGCTCTTGGCAACA 77981
Query 46502 CGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCA 46561
||| |||| | || | || ||||| || || ||| | |||||||| || | ||||
Sbjct 77980 AGAAACATTATAACTCCACGAACCCATTCGACTTCATGGATAACATCTCGCTTGCCGGCA 77921
Query 46562 AAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595
| || || ||||| || ||||| || ||||| ||
Sbjct 77920 AGACCAACTTTTTTGAGAAGCGTGTTGGCGATTA 77887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012569893760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |