Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq7 226 4e-54
seq6 84.2 3e-11
>seq7
Length=1353353
Score = 226 bits (250), Expect = 4e-54
Identities = 593/899 (66%), Gaps = 12/899 (1%)
Strand=Plus/Minus
Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052
||||| |||||||| | |||| | | ||||||| || | ||||| | | | |
Sbjct 416200 TCGAATTCGTCTCCGTAGACATCGGCGAGTCCAGATGCCTCGTTTGGACAGAATAGTGTC 416141
Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112
|| || || | | || || |||||||| || | || ||| |||| || || | ||
Sbjct 416140 CAATCGCCATTCTTCTCAACCCGTTTCATGAACAAGTCGGGAGTCCAGAGGGCGAGGAAA 416081
Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA---AGATCGAGGAACGCC 63169
||||||| || ||| ||| || || || || |||||| || || | ||| |
Sbjct 416080 AGATCTCGGGCTCTCACTTCTTCTTTACC---ATGATTTTTACGGAGGTCCAAAAACTCA 416024
Query 63170 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 63229
| | ||||| ||||| ||||| | || || || | | | ||||| ||||| || ||
Sbjct 416023 AATACGTCAGAGTGCCAAGGTTCAAGATAAATAGCAAAAGCACCAGGGCGTTTATTGCCG 415964
Query 63230 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 63289
|||||||| | ||||| || || || ||| | || | | ||| ||||| || |||||
Sbjct 415963 CCCTGATCCACATATCTGGCAGTATTGTTAAAGACACGAAGCATGGGAATGATCCCATTA 415904
Query 63290 GATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT-AG 63348
|| | ||||| || |||| || ||| ||| | ||||| || | | | | | ||
Sbjct 415903 GAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTTGCACGGAT-TCGGTGAACGTTGAG 415845
Query 63349 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCC 63408
|| || ||||| || | || || || | || ||| || | ||||||||||| ||
Sbjct 415844 TCCAATACCCCCAGCAGTCTTGGAAATCAGAGCACATGTCTTCAGTGTATCATAGATCCC 415785
Query 63409 CTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT 63468
||| |||||||| ||| |||| | || || || ||| || ||| || | || ||
Sbjct 415784 CTCAATACTATCCTCCTTCATATCAATAAGGAAGCAGGAAGCCATCTGTGGTTGAGGTGT 415725
Query 63469 TCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTA 63528
||||||||| || | || ||||||||||| ||||| |||||| || | || | |||
Sbjct 415724 TCCCGCATTGAAAAGTGTGGGAGAAGCGTGGGTAAAAAATTTTTGGGACATCAGGTGGTA 415665
Query 63529 CGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACAT 63588
|||||||| ||| || || ||| |||||||| || || || || ||||| | |||
Sbjct 415664 TGTCTCAATCGCTTTATCAATGTCCTCATGATGAATACCAACGGCAACGCGCATAATCAT 415605
Query 63589 GTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGT 63648
||||| || | |||| | | ||| ||| ||| | | | || || | |||| ||
Sbjct 415604 ATGCTGCGGACGTTCAGCAACTTTGCCGTTGATTCTTAGTAGATACGACCTCTCCAGTGT 415545
Query 63649 TTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGT 63706
|| || ||||| || | ||| ||||| || || || |||| ||| | ||||| ||
Sbjct 415544 CTTGAACCCAAAGTACTGGTAGTTGAAA--TCACGGTCATAAACGATAGCGGAGTTCAGC 415487
Query 63707 TTATCCTTATATTTGTTAACTACATCCATGGTAATACTTGAAATAATAGGAAAATGTTTC 63766
| || | ||| | || | ||| | | || || || || ||| | |
Sbjct 415486 TCTTCGGCGTGTTTCATTACAATATCGTATATTTTTCTGGATATCATGGGAGCAGGGCGG 415427
Query 63767 CCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttttttt 63826
|| || || || ||||| | | | ||| || || || |||| |||| ||
Sbjct 415426 TTGTTCTTTGGGTTCACATATCTATAGAGATCTTCGATAACGGACGAAAATTGTTTCTTG 415367
Query 63827 GTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 63885
|||| ||||| | || || ||||| |||||||| || || ||||||||||| || ||
Sbjct 415366 GTTTGCTTGTGCAAGTTGGACACGGCGATTCTAGCAGCAAGGATGGCATAATCAGGGTG 415308
Score = 125 bits (138), Expect = 9e-24
Identities = 701/1113 (63%), Gaps = 23/1113 (2%)
Strand=Plus/Minus
Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909
||||||||||| || || || || | | || || ||||||||||| || ||||| | |
Sbjct 417403 GTGAATTGAATTGGGGCAGAAGCAGCCATAGTCCGAAGATAGTACATGCCGGTTTTCAAA 417344
Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATA 61969
|| | |||| || ||||||||| || || | |||| | || || | |
Sbjct 417343 CCTAATTTCCAGCCAGCAAAATGCATGCTAGTAATTTTGCCCATTGTGGGCTCCTTAAGA 417284
Query 61970 TGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATA 62029
|| ||||| | ||||| |||||||||||| || || | ||||||||||| | | |
Sbjct 417283 TGAATATTGAGGGATTGGGATTGATCGATGAAAGCACCACGATCTGCAGCCATCTGAACA 417224
Query 62030 ATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGG 62089
|| ||| || | ||||||||| | ||| || |||| || || || || || |
Sbjct 417223 ATAGTCCGCTGAGAAATTTCCCATACAGTCTTGTAAAGGGCTTTGATGTCATCGGGGATA 417164
Query 62090 TTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTC 62146
|| | |||| ||||| || |||||||| || || || | ||| || || | ||| |
Sbjct 417163 TTGGGAATATTTTGAATTGAGCCACCATCAGCGATGATGCGATTTTTCATGTTGTCAGAC 417104
Query 62147 CATAATTTTCTCTCGGTTAA----AACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 62202
|| | | | ||| || | || | || || || ||||| ||||| |||||
Sbjct 417103 CAAAGT----CCAAGGTCAACAAGATCTTTCAGAAGCCATGGGTTAACAACTTGGAATTC 417048
Query 62203 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATT 62262
||| | | |||| ||||| || ||||| ||| || || || | | || ||
Sbjct 417047 TCCTGCAAGGACTCGCCGAGAATAGATATTTGAGGTGTATGGCTCAAAGCATTCGTTGAA 416988
Query 62263 TCCCAAAATTTGAGCAGTTGAT-GCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAA 62321
|| | ||||| || | | | ||||| |||||||| || || | | ||| || | |
Sbjct 416987 GCCAAGGATTTG-GCTGGTACTAGCAGTGGGCATAGGGGCAACAAGAAGACTGTTGCGTA 416929
Query 62322 GACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAA 62381
||||| | || |||| | || |||| |||||| |||||| || || ||| |
Sbjct 416928 CACCGTGTTTTGCTATTTCTTTCTTAAGAGAAACCCAATCCCAAAGGTCAGAAGGTGTTA 416869
Query 62382 CNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCGT 62441
| || | ||| || | | | || ||| ||||||| ||||
Sbjct 416868 CGTTCCACATATCATACTGCAAAATTCCCTGAGAAACAGGAGAACCTTCATATGTTTCGT 416809
Query 62442 ATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTT 62501
|||| ||||| ||| | ||||| || || | || | | ||||| || |
Sbjct 416808 ATGGGCCTTCGGTCTTTGAAAGTTCGCAGGATGCAGTCAGGGCGGCATGGTAAATTGTCT 416749
Query 62502 CGAAGATCTTCTTATTTAGAT-CTTGCGCTTCCAGGCTATCAAATGGATAATTTAAGAG- 62559
| ||||||| |||| || | ||| || ||| ||||| || || | ||||
Sbjct 416748 CAAAGATCTGAATATTCAGCTGCTTAGCCTGAGAGG-AGTCAAAAGGCAAACGT-AGAGC 416691
Query 62560 AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62619
| || || || || | ||||||||| |||| | | || || | ||| | |||
Sbjct 416690 CAAGAAGGCATCAGCGAGTCCTTGAACCCCAAGAGCAATTGGGCGATGACGGAAGTTACT 416631
Query 62620 GATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGAC 62679
|| |||||| |||| || || | || |||| || || || || | ||| | ||
Sbjct 416630 CTTTCGAGCTTCGGGAACGGGGTAGTGGTTGTTATCAATGATCTTGTTTAAATTGCGCAC 416571
Query 62680 AATTACTTTGACCACATCCTTCAGTTTGAGAAAATC-AAATCGCC-CATCTATTACAAAC 62737
| |||| | || | | || ||| ||| || | ||||| | || |||
Sbjct 416570 CACAACTTGGGTGACTGCGTGCAATTTACCAAAGTCGTACTCGCCGCGGATAGCGTCAAC 416511
Query 62738 --ATGTT--CAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATA 62793
||||| ||| |||| ||||| ||||| || ||||| || |||| | | | |||
Sbjct 416510 GTATGTTGGCAAAGCAAGTGATGCTAGATTGCACACGGCGACTTCATCGGGGGCAGTATA 416451
Query 62794 TTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACT 62853
| || || || || || | |||| || | || ||||| | || | || || ||
Sbjct 416450 CTCAATAATTTCCGTACATAAATTAGAACTTCTAATAGTTCCAAGGTTCTTCTGGTTGCT 416391
Query 62854 CTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTC 62913
||| ||||| |||||||| ||||| ||||| ||| | ||||| || | |||| |||
Sbjct 416390 CTTCCGATTACAGGCATCCTTGTAAAGCATGAAAGGATTTCCAGTCTCGGTTTGAGCTTC 416331
Query 62914 TATAATCGCTTTCCAGACGACTCGAGCCTTTAT 62946
| || || | ||||| | ||||||| ||
Sbjct 416330 CAAGATAGCGTACCAGAGCTTTTGAGCCTTGAT 416298
>seq6
Length=1499889
Score = 84.2 bits (92), Expect = 3e-11
Identities = 136/195 (70%), Gaps = 3/195 (2%)
Strand=Plus/Plus
Query 32675 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 32734
||| ||||||||||| | | || | |||||||| || || || || ||||| || ||
Sbjct 78186 GTGAAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTAAGGCCAGGCATGAGACC 78245
Query 32735 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 32794
|||||| || | ||| || || || ||||| || ||| ||||| || || || || ||
Sbjct 78246 ACGCTTCTTTAACCAGAAAATAGAAGCAAAAGAACCACTGAAGAAGATACCCTCAACAGC 78305
Query 32795 CGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATCCACTTTTGAGC 32851
|| || |||||||| | || | || | || | || || || ||||| |||
Sbjct 78306 GGCGAAAGCAATAAGACGCTGTGCAAATGTGGATTCACTATCCTGGATCCATCGAATAGC 78365
Query 32852 CCAATCGGCCTTCTT 32866
||| ||||| |||||
Sbjct 78366 CCAGTCGGCTTTCTT 78380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631691104400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |