Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq9 172 1e-37
seq5 114 2e-20
seq2 95.1 2e-14
seq6 87.8 3e-12
>seq9
Length=1275601
Score = 172 bits (190), Expect = 1e-37
Identities = 178/233 (76%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288
|| |||||||| || | | ||| |||||||| || ||| |||||| ||||| || ||
Sbjct 1015878 TAGTTTCCTCCACGCAATCTCAAAACCAAGTGCAGAGTGCTCTCTTTCTGGATATTGTAG 1015819
Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348
|| || || || | |||||||| | ||||| ||||| || ||||| | |||||||||
Sbjct 1015818 TCTGAAAGCGTACGGCCATCTTCAAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCG 1015759
Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT 68408
|||||||| |||||||| || ||||| |||| |||||| || || ||||| | |||
Sbjct 1015758 GGTGGAATACCTTCCTTATCCTGAATTTTTGTCTTGACATTGTCAATCGTGTCCGAAGAT 1015699
Query 68409 TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| ||||| || |||||||| || || || || || ||||| || ||||||||
Sbjct 1015698 TCAACTTCTAATGTGATGGTCTTGCCGGTAAGTGTTTTGACAAAAATCTGCAT 1015646
Score = 161 bits (178), Expect = 2e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| ||||| | ||||| || | ||| || || ||||||||||||||||| ||||| ||
Sbjct 1015644 CCACCGCGCAACCGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGAC 1015585
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
||||| | || || || | || || |||||||| || || | ||| ||||| |||||
Sbjct 1015584 AGTGTGCGGCCGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGG 1015525
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| ||||| || ||||||||||||| |||||| ||||| || || | || || |||
Sbjct 1015524 ATACCTTCTTTATCTTGAATCTTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCAACT 1015465
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || ||||| |||||||| || | ||| || ||||| || |||||
Sbjct 1015464 TCTAATGTGATTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCAT 1015418
Score = 159 bits (176), Expect = 6e-34
Identities = 176/232 (76%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | |||||||| || || ||| || |||||||| || ||||||
Sbjct 1015129 CCGCCACGGAGGCGGAGGACCAAGTGGAGGGTACTCTCCTTCTGGATGTTGTAGTCGGAG 1015070
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | ||| || || ||||| || | | ||||||||| || ||
Sbjct 1015069 AGGGTGCGGCCATCTTCAAGCTGTTTACCAGCGAAAATCAAGCGTTGTTGGTCTGGAGGG 1015010
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413
||||| ||||||||||| ||||| | ||| || || ||||| || |||| | || ||
Sbjct 1015009 ATGCCCTCCTTGTCTTGGATCTTAGTCTTAACATTATCAATGGTATC-GCTGGACTCGAC 1014951
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465
|| | ||||||||| || || || |||||||||||||| |||||||| |||
Sbjct 1014950 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCATAATG 1014899
>seq5
Length=1732373
Score = 114 bits (126), Expect = 2e-20
Identities = 135/180 (75%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|||||||| ||||||||| | || | ||||| || | |||||| |||||||| ||
Sbjct 840094 TTTTGGATATTATAATCGCTCAAAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAAATC 840153
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
| || |||||||| || ||||| || |||||||| |||||||| |||||| ||
Sbjct 840154 AATCGCTGTTGGTCTGGCGGAATACCCTCCTTGTCCTGAATCTTGCTCTTGACATTATCA 840213
Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|| || || ||| || || || || | |||||||| || || ||||||||||| |||||
Sbjct 840214 ATTGTATC-GCTCGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTAACGAA 840272
>seq2
Length=1931404
Score = 95.1 bits (104), Expect = 2e-14
Identities = 76/92 (83%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429
|||||||| | |||||| || ||||| || | |||||| || || | ||||||||||
Sbjct 802038 TGAATCTTGGTCTTGACATTGTCAATGGTATCCGATGATTCCACCTCAAGGGTGATGGTT 801979
Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| |||||||||||||||||||| ||||||||
Sbjct 801978 TTACCCGTGAGGGTCTTGACGAAGATCTGCAT 801947
>seq6
Length=1499889
Score = 87.8 bits (96), Expect = 3e-12
Identities = 132/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || || || ||||| || || || ||| || ||||||| |||||| |
Sbjct 77868 CATGACACCAGCTTTTTGGTAATCGCCAACACGCTTCTCAAAAAAGTTGGTCTTGCCGGC 77927
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
|| || ||| ||||||||||| || |||||| || | | | || || || ||
Sbjct 77928 AAGCGAGATGTTATCCATGAAGTCGAATGGGTTCGTGGAGTTATAATGTTTCTTGTTGCC 77987
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
|| ||| | | ||||| || |||||||||||||| |||| ||||| | |||||
Sbjct 77988 AAGAGCTACAAGTAACCGGTCGGCTACGAACTCGATGTATTGGCACATCAACTTGGAGTT 78047
Query 10115 CATGCCAA 10122
||||||||
Sbjct 78048 CATGCCAA 78055
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921621950709080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |