Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq9 172 1e-37 seq5 114 2e-20 seq2 95.1 2e-14 seq6 87.8 3e-12 >seq9 Length=1275601 Score = 172 bits (190), Expect = 1e-37 Identities = 178/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 68229 TAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAA 68288 || |||||||| || | | ||| |||||||| || ||| |||||| ||||| || || Sbjct 1015878 TAGTTTCCTCCACGCAATCTCAAAACCAAGTGCAGAGTGCTCTCTTTCTGGATATTGTAG 1015819 Query 68289 TCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCG 68348 || || || || | |||||||| | ||||| ||||| || ||||| | ||||||||| Sbjct 1015818 TCTGAAAGCGTACGGCCATCTTCAAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCG 1015759 Query 68349 GGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT 68408 |||||||| |||||||| || ||||| |||| |||||| || || ||||| | ||| Sbjct 1015758 GGTGGAATACCTTCCTTATCCTGAATTTTTGTCTTGACATTGTCAATCGTGTCCGAAGAT 1015699 Query 68409 TCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||| || |||||||| || || || || || ||||| || |||||||| Sbjct 1015698 TCAACTTCTAATGTGATGGTCTTGCCGGTAAGTGTTTTGACAAAAATCTGCAT 1015646 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| | ||||| || | ||| || || ||||||||||||||||| ||||| || Sbjct 1015644 CCACCGCGCAACCGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGAC 1015585 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | || || || | || || |||||||| || || | ||| ||||| ||||| Sbjct 1015584 AGTGTGCGGCCGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGG 1015525 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| || ||||||||||||| |||||| ||||| || || | || || ||| Sbjct 1015524 ATACCTTCTTTATCTTGAATCTTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCAACT 1015465 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || ||||| |||||||| || | ||| || ||||| || ||||| Sbjct 1015464 TCTAATGTGATTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCAT 1015418 Score = 159 bits (176), Expect = 6e-34 Identities = 176/232 (76%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | |||||||| || || ||| || |||||||| || |||||| Sbjct 1015129 CCGCCACGGAGGCGGAGGACCAAGTGGAGGGTACTCTCCTTCTGGATGTTGTAGTCGGAG 1015070 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||| || || ||||| || | | ||||||||| || || Sbjct 1015069 AGGGTGCGGCCATCTTCAAGCTGTTTACCAGCGAAAATCAAGCGTTGTTGGTCTGGAGGG 1015010 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413 ||||| ||||||||||| ||||| | ||| || || ||||| || |||| | || || Sbjct 1015009 ATGCCCTCCTTGTCTTGGATCTTAGTCTTAACATTATCAATGGTATC-GCTGGACTCGAC 1014951 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || | ||||||||| || || || |||||||||||||| |||||||| ||| Sbjct 1014950 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACGAAGATCTGCATAATG 1014899 >seq5 Length=1732373 Score = 114 bits (126), Expect = 2e-20 Identities = 135/180 (75%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 |||||||| ||||||||| | || | ||||| || | |||||| |||||||| || Sbjct 840094 TTTTGGATATTATAATCGCTCAAAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAAATC 840153 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 | || |||||||| || ||||| || |||||||| |||||||| |||||| || Sbjct 840154 AATCGCTGTTGGTCTGGCGGAATACCCTCCTTGTCCTGAATCTTGCTCTTGACATTATCA 840213 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || || || ||| || || || || | |||||||| || || ||||||||||| ||||| Sbjct 840214 ATTGTATC-GCTCGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTAACGAA 840272 >seq2 Length=1931404 Score = 95.1 bits (104), Expect = 2e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 68370 TGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTT 68429 |||||||| | |||||| || ||||| || | |||||| || || | |||||||||| Sbjct 802038 TGAATCTTGGTCTTGACATTGTCAATGGTATCCGATGATTCCACCTCAAGGGTGATGGTT 801979 Query 68430 TTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || |||||||||||||||||||| |||||||| Sbjct 801978 TTACCCGTGAGGGTCTTGACGAAGATCTGCAT 801947 >seq6 Length=1499889 Score = 87.8 bits (96), Expect = 3e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || || || ||||| || || || ||| || ||||||| |||||| | Sbjct 77868 CATGACACCAGCTTTTTGGTAATCGCCAACACGCTTCTCAAAAAAGTTGGTCTTGCCGGC 77927 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 || || ||| ||||||||||| || |||||| || | | | || || || || Sbjct 77928 AAGCGAGATGTTATCCATGAAGTCGAATGGGTTCGTGGAGTTATAATGTTTCTTGTTGCC 77987 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 || ||| | | ||||| || |||||||||||||| |||| ||||| | ||||| Sbjct 77988 AAGAGCTACAAGTAACCGGTCGGCTACGAACTCGATGTATTGGCACATCAACTTGGAGTT 78047 Query 10115 CATGCCAA 10122 |||||||| Sbjct 78048 CATGCCAA 78055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621950709080