Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq6 127 5e-24 seq8 91.5 3e-13 >seq6 Length=1499889 Score = 127 bits (140), Expect = 5e-24 Identities = 180/253 (71%), Gaps = 0/253 (0%) Strand=Plus/Minus Query 243501 AATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCG 243560 |||||||| ||||| || |||| ||| | |||||| | || ||| ||||||| Sbjct 78120 AATCATCATTGAAGCCGTGGAAATCGAGCAAGAATTCTTAACGGATGCTCTTCCATGTGC 78061 Query 243561 GCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 || ||||||||||||| | | ||| | || |||||||| |||||||||||||| | Sbjct 78060 TCTCCTTGGCATGAACTCCAAGTTGATGTGCCAATACATCGAGTTCGTAGCCGACCGGTT 78001 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 | | || ||||| | ||||| || ||||||| |||||| || | ||| ||||| Sbjct 78000 ACTTGTAGCTCTTGGCAACAAGAAACATTATAACTCCACGAACCCATTCGACTTCATGGA 77941 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACG 243740 ||| |||||| || || || ||||| || || |||||||| | ||||| ||| Sbjct 77940 TAACATCTCGCTTGCCGGCAAGACCAACTTTTTTGAGAAGCGTGTTGGCGATTACCAAAA 77881 Query 243741 CCCTGGTGTGATG 243753 ||||||| ||| Sbjct 77880 AGCTGGTGTCATG 77868 >seq8 Length=1298916 Score = 91.5 bits (100), Expect = 3e-13 Identities = 248/370 (67%), Gaps = 10/370 (3%) Strand=Plus/Plus Query 298085 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAG-AAGATTAGGGAAACA 298143 || || || |||||||| | |||| || || ||||||| || ||| || | || || Sbjct 1214629 ACAATCGGGGTGATGAATTCGATCAAAAAACCCGGAATTTTAAGCAAGCTTGGAAAAGCA 1214688 Query 298144 GCTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGT 298203 || |||| | | || || | || || ||| || | || ||| ||| |||||| Sbjct 1214689 ACT-TGGAGATAATTTATTAAAAGTCCCTTAATATGGCTGCCATCATAATCTTGGTCGGT 1214747 Query 298204 CATGATCATCACATGACCGTAACGAAG-CGAGGACGTGTCTTTGTACACTTTACCGGTTT 298262 ||||||||| | |||||||||||||| | | | || ||| | || |||| || Sbjct 1214748 CATGATCATAAGGTGACCGTAACGAAGGCCACGG-GTATCTGTATATTCTTTCTTATGTT 1214806 Query 298263 GAAGGCCGAGAATTTGTTTGAGCG-CTGTGATTTCTTCGTTCTTCGTGATGCTTG--CCA 298319 | | |||||||| | || | ||| |||||||| || || | || ||| | | Sbjct 1214807 GTAAGCCGAGAAAATTCTTAATATTCTG-GATTTCTTGATTTTTTGAAAT--TTGATCGA 1214863 Query 298320 CGGATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGC 298379 | ||||||||||| ||||| | || |||||||| || || || || || | ||| Sbjct 1214864 CAGATGCATCGCGCACATTGAGAAGCTTTCCACGGAGGGGAAAAACACCGAAGAGATCGG 1214923 Query 298380 GACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAA 298439 | || ||||||| |||||| || ||||| | || ||||| || || || || | Sbjct 1214924 GTCCAACCACGGCTCTCCCTGCCATCGCAAGACCCTTGGCTGAATCTCCTTCAGTAAGGA 1214983 Query 298440 TGAGAGTGCA 298449 |||| ||||| Sbjct 1214984 TGAGTGTGCA 1214993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879448904650