Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq6 127 5e-24
seq8 91.5 3e-13
>seq6
Length=1499889
Score = 127 bits (140), Expect = 5e-24
Identities = 180/253 (71%), Gaps = 0/253 (0%)
Strand=Plus/Minus
Query 243501 AATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCG 243560
|||||||| ||||| || |||| ||| | |||||| | || ||| |||||||
Sbjct 78120 AATCATCATTGAAGCCGTGGAAATCGAGCAAGAATTCTTAACGGATGCTCTTCCATGTGC 78061
Query 243561 GCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620
|| ||||||||||||| | | ||| | || |||||||| |||||||||||||| |
Sbjct 78060 TCTCCTTGGCATGAACTCCAAGTTGATGTGCCAATACATCGAGTTCGTAGCCGACCGGTT 78001
Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680
| | || ||||| | ||||| || ||||||| |||||| || | ||| |||||
Sbjct 78000 ACTTGTAGCTCTTGGCAACAAGAAACATTATAACTCCACGAACCCATTCGACTTCATGGA 77941
Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACG 243740
||| |||||| || || || ||||| || || |||||||| | ||||| |||
Sbjct 77940 TAACATCTCGCTTGCCGGCAAGACCAACTTTTTTGAGAAGCGTGTTGGCGATTACCAAAA 77881
Query 243741 CCCTGGTGTGATG 243753
||||||| |||
Sbjct 77880 AGCTGGTGTCATG 77868
>seq8
Length=1298916
Score = 91.5 bits (100), Expect = 3e-13
Identities = 248/370 (67%), Gaps = 10/370 (3%)
Strand=Plus/Plus
Query 298085 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAG-AAGATTAGGGAAACA 298143
|| || || |||||||| | |||| || || ||||||| || ||| || | || ||
Sbjct 1214629 ACAATCGGGGTGATGAATTCGATCAAAAAACCCGGAATTTTAAGCAAGCTTGGAAAAGCA 1214688
Query 298144 GCTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGT 298203
|| |||| | | || || | || || ||| || | || ||| ||| ||||||
Sbjct 1214689 ACT-TGGAGATAATTTATTAAAAGTCCCTTAATATGGCTGCCATCATAATCTTGGTCGGT 1214747
Query 298204 CATGATCATCACATGACCGTAACGAAG-CGAGGACGTGTCTTTGTACACTTTACCGGTTT 298262
||||||||| | |||||||||||||| | | | || ||| | || |||| ||
Sbjct 1214748 CATGATCATAAGGTGACCGTAACGAAGGCCACGG-GTATCTGTATATTCTTTCTTATGTT 1214806
Query 298263 GAAGGCCGAGAATTTGTTTGAGCG-CTGTGATTTCTTCGTTCTTCGTGATGCTTG--CCA 298319
| | |||||||| | || | ||| |||||||| || || | || ||| | |
Sbjct 1214807 GTAAGCCGAGAAAATTCTTAATATTCTG-GATTTCTTGATTTTTTGAAAT--TTGATCGA 1214863
Query 298320 CGGATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGC 298379
| ||||||||||| ||||| | || |||||||| || || || || || | |||
Sbjct 1214864 CAGATGCATCGCGCACATTGAGAAGCTTTCCACGGAGGGGAAAAACACCGAAGAGATCGG 1214923
Query 298380 GACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAA 298439
| || ||||||| |||||| || ||||| | || ||||| || || || || |
Sbjct 1214924 GTCCAACCACGGCTCTCCCTGCCATCGCAAGACCCTTGGCTGAATCTCCTTCAGTAAGGA 1214983
Query 298440 TGAGAGTGCA 298449
|||| |||||
Sbjct 1214984 TGAGTGTGCA 1214993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102879448904650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |