Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq7 185 1e-41 seq6 147 3e-30 >seq7 Length=1353353 Score = 185 bits (204), Expect = 1e-41 Identities = 629/969 (65%), Gaps = 26/969 (3%) Strand=Plus/Minus Query 113698 TTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTT 113757 |||||||||||||||||| |||||||| || ||||| | || | | | | Sbjct 417269 TTGGGATTGATCGATGAAAGCACCACGATCTGCAGCCATCTGAACAATAGTCCGCTGAGA 417210 Query 113758 GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTG 113817 |||||||| ||||| |||| ||| || || ||||| ||||||| |||||||| Sbjct 417209 AATTTCCCATACAGTCTTGTAAAGGGCTTTGATGTCATCGGGGATATTGGGAATATTTTG 417150 Query 113818 GATGGAGCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTT 113877 || |||||||| | || ||| ||| ||||| | | ||||| || |||| | Sbjct 417149 AATTGAGCCACCATCAGCGATGATGCGATTTTTCATGTTGTCAGACCAAAGTCCAAGGTC 417090 Query 113878 TTTGAGATCCTCCACGAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGT 113935 ||||| | || || ||| | | ||||| || || || || ||| || Sbjct 417089 AACAAGATCTTTCAGAAGCCATGGGT--TAACAACTTGGAATTCTCCTGCAAGGACTCGC 417032 Query 113936 CTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCG 113995 | ||||||||| | ||||||||||||||||| || ||| || | ||||||| | Sbjct 417031 CGAGAATAGATATTTGAGGTGTATGGCTCAAAGCATTCGTTGAAGCCAAGGATTTGGCTG 416972 Query 113996 GTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT-TTTCCCTAAT 114054 || || |||||||| || || | ||||| ||||| || | ||| | ||| ||| | Sbjct 416971 GTACTAGCAGTGGGCATAGGGGCAACAAGAAGACTGTTGCGTACACCGTGTTTTGCTATT 416912 Query 114055 GCGTTCCTTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCA 114112 | ||| || || | |||| || | | | || || | | | |||||||||| Sbjct 416911 TCTTTC-TTAAGAGAAACCCAATCCCAAAGGTCAGAAG-GTGTTACGTT-CCACATATCA 416855 Query 114113 AACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACC 114172 |||| | || || || || | || || || ||| |||| ||||||||||| || | Sbjct 416854 TACTGCAAAATTCCCTGAGAAACAGGAGAACCTTCATATGTTTCGTATGGGCCTTCGGTC 416795 Query 114173 TCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCA 114232 | | | |||| || || ||||| || || || ||||||||||| || || | Sbjct 416794 TTTGAAAGTTCGCAGGATGCAGTCAGGGCGGCATGGTAAATTGTCTCAAAGATCTGAATA 416735 Query 114233 TTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG--GCACAAAATAAATACATCCG 114290 |||| ||| |||| ||| ||||| | | || | | || || |||| | Sbjct 416734 TTCAGCTGCTTAGCCTGAGAGGAGTCAAAAGGCAAACGTAGAGCCAAG--AAGGCATCAG 416677 Query 114291 CGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCT 114350 |||| ||||| || || || ||||||||||||| | | ||| ||||||||| Sbjct 416676 CGAGTCCTTGAACCCCAAGAGCAATTGGGCGATGACGGAAGTTACTCTTTCGAGCTTCGG 416617 Query 114351 CCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGA 114410 ||||| || || |||| || | | | |||| ||| ||||| | |||| Sbjct 416616 GAACGGGGTAGTGGTTGTTATCAATGATCTTGTTTAAATTGCGCACCACAACTTGGGTGA 416557 Query 114411 TTTCATGAAGCTTT------TCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAG 114464 | | || | || ||||| || | ||| | | ||| || || | | Sbjct 416556 CTGCGTGCAATTTACCAAAGTCGTACTCG---CCGCGGATAGCGTCA---ACGTATGTTG 416503 Query 114465 GAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 114524 | | || | ||| || ||||| ||||| | | ||||| |||| ||||| |||| Sbjct 416502 GCAAAGCAAGTGATGCTAGATTGCACACGGCGACTTCATCGGGGGCAGTATACTCAATAA 416443 Query 114525 TTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 114584 |||||||||| ||||| ||||| |||| || || | |||||| || || ||| | Sbjct 416442 TTTCCGTACATAAATTAGAACTTCTAATAGTTCCAAGGTTCTTCTGGTTGCTCTTCCGAT 416383 Query 114585 TACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 114644 |||| |||||||||||||||||| | || | || ||||| ||||| | | | |||| Sbjct 416382 TACAGGCATCCTTGTAAAGCATGAAAGGATTTCCAGTCTCGGTTTGAGCTTCCAAGATAG 416323 Query 114645 CCTTCCAGA 114653 | | ||||| Sbjct 416322 CGTACCAGA 416314 >seq6 Length=1499889 Score = 147 bits (162), Expect = 3e-30 Identities = 306/453 (68%), Gaps = 12/453 (3%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCT-GATATTCTCCA 125816 ||| || ||||| |||||||| || ||||| ||||| ||| | |||| ||| || |||| Sbjct 77886 GTAATCGCCAACACGCTTCTCAAAAAAGTTGGTCTTGCCGGC-AAGCGAGATGTTATCCA 77944 Query 125817 TAAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAG 125871 | || || ||||||||| | ||||| || |||||| |||| | || Sbjct 77945 TGAAGTCGAATGGGTTCGTGGAGTTATAATGTTTCTTGTTG-----CCAAGAGCTACAAG 77999 Query 125872 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 125931 | || || | ||| |||| ||||| | ||||| || |||||||| || | ||| Sbjct 78000 TAACCGGTCGGCTACGAACTCGATGTATTGGCACATCAACTTGGAGTTCATGCCAAGGAG 78059 Query 125932 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGAT 125991 |||||| || || ||| | ||| | | ||| |||||||||||||| | ||| Sbjct 78060 AGCACATGGAAGAGCATCCGTTAAGAATTCTTGCTCGATTTCCACGGCTTCAATGATGAT 78119 Query 125992 GGCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAA 126051 || || | || | || | | ||| | |||||| ||||| Sbjct 78120 TGCTGCAACAGCTTCTGGGCTGGGACGGTGGCGGAGGTGAGAGAAGAGGAGGCAAGCAAA 78179 Query 126052 CTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCAT 126111 || ||| |||||||||||||| ||||| || || || ||||| || || ||||| Sbjct 78180 GTCAGTGTGAAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTAAGGCCAGGCAT 78239 Query 126112 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTC 126171 |||||| |||||||| ||||||||||| | | ||| ||||| ||||||||| ||||| Sbjct 78240 GAGACCACGCTTCTTTAACCAGAAAATAGAAGCAAAAGAACCACTGAAGAAGATACCCTC 78299 Query 126172 CACACACGCGAACGCAAAGAGACGCTCAGCAAA 126204 ||| ||||| |||| ||||||| ||||| Sbjct 78300 AACAGCGGCGAAAGCAATAAGACGCTGTGCAAA 78332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353308790120