Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq9 120 3e-22
>seq9
Length=1275601
Score = 120 bits (132), Expect = 3e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312
||||| || || ||||| |||| | || || | |||||||| |||||||||||| |
Sbjct 1015836 TCTTTCTGGATATTGTAGTCTGAAAGCGTACGGCCATCTTCAAGTTGCTTGCCGGCAAAG 1015777
Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372
||||| ||||| |||||||| ||||| ||||| || || || |||||| ||| |||
Sbjct 1015776 ATGAGGCGCTGTTGGTCGGGTGGAATACCTTCCTTATCCTGAATTTTTGTCTTGACATTG 1015717
Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432
|| | || || | || ||||||| || | |||||||||||| | ||||| ||
Sbjct 1015716 TCAATCGTGTCCGAAGATTCAACTTCTAATGTGATGGTCTTGCCGGTAAGTGTTTTGACA 1015657
Query 64433 AAAATTTGCAT 64443
||||| |||||
Sbjct 1015656 AAAATCTGCAT 1015646
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| |||||||| | | || || || | || || |||||||| ||||||||||| |
Sbjct 1015645 ACCACCGCGCAACCGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGA 1015586
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||||| |||| || || || || ||||| | || || || |||||||| || ||
Sbjct 1015585 CAGTGTGCGGCCGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGG 1015526
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| |||||||| ||||| || ||| || || || | |||||| | || ||
Sbjct 1015525 GATACCTTCTTTATCTTGAATCTTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCAAC 1015466
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| || | || || ||||| || ||||||||||||||||||||
Sbjct 1015465 TTCTAATGTGATTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCAT 1015418
Score = 93.3 bits (102), Expect = 4e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312
|| || || |||||||| || | || |||||| | ||||||||||| || || || ||
Sbjct 1015093 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCAAGCTGTTTACCAGCGAAA 1015034
Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372
|| | || || ||||| ||||| || || || || ||||| || || ||| |||
Sbjct 1015033 ATCAAGCGTTGTTGGTCTGGAGGGATGCCCTCCTTGTCTTGGATCTTAGTCTTAACATTA 1014974
Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432
|| | ||||| | || || || || | || | ||||||||| |||| || || |||
Sbjct 1014973 TCAATGGTATCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTGACG 1014914
Query 64433 AAAATTTGCAT 64443
|| || |||||
Sbjct 1014913 AAGATCTGCAT 1014903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644556423160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |