Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq9 123 2e-23
seq6 96.9 3e-15
seq7 82.4 8e-11
>seq9
Length=1275601
Score = 123 bits (136), Expect = 2e-23
Identities = 167/229 (73%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || ||||| |||||||| | || | | | ||||| ||||| |||||||| || |
Sbjct 1015644 CCACCGCGCAACCGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGAC 1015585
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || |||||||||||||||||||| ||||||| || || ||||| || ||
Sbjct 1015584 AGTGTGCGGCCGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGG 1015525
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
||||||||||| || ||| | |||||||| | ||| || | || || | ||||| |
Sbjct 1015524 ATACCTTCTTTATC-TTGAATCTTTGTTTTGACGTTG-TCGATCGTATCAGAAGACTCAA 1015467
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| || | || | ||||| || || | |||||||| ||||| |||||
Sbjct 1015466 CTTCTAATGTGATTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCAT 1015418
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || ||||| | |||||| || || | | ||| || || || ||||||||
Sbjct 1015872 CCTCCACGCAATCTCAAAACCAAGTGCAGAGTGCTCTCTTTCTGGATATTGTAGTCTGAA 1015813
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||| || || ||||| || |||| | |||| || ||||||||||| || ||
Sbjct 1015812 AGCGTACGGCCATCTTCAAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGGA 1015753
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|||||||| || || ||| ||||||| || | |||| | | ||||| | || || |
Sbjct 1015752 ATACCTTCCTTATCC-TGAATTTTTGTCTTGACATTGT-CAATCGTGTCCGAAGATTCAA 1015695
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| || | || | || || || || || ||||| ||||||||||||||
Sbjct 1015694 CTTCTAATGTGATGGTCTTGCCGGTAAGTGTTTTGACAAAAATCTGCAT 1015646
Score = 84.2 bits (92), Expect = 2e-11
Identities = 131/185 (71%), Gaps = 2/185 (1%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| ||||||||||| || | || || ||||||||||||||||| |
Sbjct 1015383 GACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGACCATCCTCGAGTTGTTTACCAGCG 1015324
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
|||| | || || ||||| || || || ||||||||||| ||| || ||| | |
Sbjct 1015323 AAGATCAATCGTTGCTGGTCGGGGGGGATGCCTTCTTTGTCCTGGATCTTGGTTTTCACA 1015264
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | ||| || | ||||| ||||| | || | || || ||||| ||||| ||
Sbjct 1015263 TTG-TCGATGGTATCAGAAGACTCGACCTCAAGGGTAATAGTCTTGCCAGTAAGAGTCTT 1015205
Query 138600 TACAA 138604
||||
Sbjct 1015204 GACAA 1015200
>seq6
Length=1499889
Score = 96.9 bits (106), Expect = 3e-15
Identities = 242/360 (67%), Gaps = 11/360 (3%)
Strand=Plus/Minus
Query 52482 ATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGAC 52541
||||| ||||| || ||| ||||||| |||| || || ||||| || || ||||| |||
Sbjct 78239 ATGCCTGGCCTTACTTTCTCCAACGAGCTGATCTCTCGTGACGAGGGTCTTCACACTGAC 78180
Query 52542 TTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTG 52601
||||| |||||| || | | | | | ||| | | | | | | | ||
Sbjct 78179 TTTGCTTGCCTCCTCTTCT---CTCACCT--CCGCCACCGTCCCAGCCCAGAAGCTGTTG 78125
Query 52602 -AGCA-TGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGG 52659
|||| | ||| || || |||| ||||| | || || || |||| || || ||
Sbjct 78124 CAGCAATCATCATTGAAGCCGTGGAAATCGAGCAAGAATTCTTAACGGATGCTCTTCCAT 78065
Query 52660 TCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATC 52719
| || || ||||||||| | ||| |||||| | ||||||||||| || || || |
Sbjct 78064 GTGCTCTCCTTGGCATGAACTCCAAGTTGATGTGCCAATACATCGAGTTCGTAGCCGACC 78005
Query 52720 GTCTGTTGGTGCAGCTCG-GGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTT 52777
| | | || ||||| |||| | | || | | ||| | || || || || ||
Sbjct 78004 GGTTACTTGT--AGCTCTTGGCAACAAGAAACATTATAACTCCACGAACCCATTCGACTT 77947
Query 52778 TATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
||| | ||||| ||||||| ||||||||||||||||| |||||||| || ||||| ||
Sbjct 77946 CATGGATAACATCTCGCTTGCCGGCAAGACCAACTTTTTTGAGAAGCGTGTTGGCGATTA 77887
>seq7
Length=1353353
Score = 82.4 bits (90), Expect = 8e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 154314 GTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGG 154373
|||||||| || || |||||| ||||| ||||| | ||||||| ||||| | ||
Sbjct 415726 GTTCCCGCATTGAAAAGTGTGGGAGAAGCGTGGGTAAAAAATTTTTGGGACATCAGGTGG 415667
Query 154374 TACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGC 154433
|| || || || || | || || || || ||||| || | || |||||||| | |
Sbjct 415666 TATGTCTCAATCGCTTTATCAATGTCCTCATGATGAATACCAACGGCAACGCGCATAATC 415607
Query 154434 ATGTGCTGCGGACGTTCGGCGACTCTATTGTCAATCTTCAAGAGATATCCATTTTCGAGG 154493
|| |||||||||||||| || ||| | || || | | ||||| | || ||
Sbjct 415606 ATATGCTGCGGACGTTCAGCAACTTTGCCGTTGATTCTTAGTAGATACGACCTCTCCAGT 415547
Query 154494 GTTTTGTAACCGAAATACTTGTATTCAAAATCTAGCTCATGAGCGATGGC 154543
|| ||| | || || |||| ||| | ||||| | |||| | |||| ||
Sbjct 415546 GTCTTGAACCCAAAGTACTGGTAGTTGAAATCACGGTCATAAACGATAGC 415497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262158072080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |