Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq9 100 3e-16
seq5 89.7 5e-13
>seq9
Length=1275601
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
||| || || |||| ||| ||||| || | || |||||| || |||||||| ||
Sbjct 1015873 TCCTCCACGCAATCTCAAAACCAAGTGCAGAGTGCTCTCTTTCTGGATATTGTAGTCTGA 1015814
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| ||| || ||| || || || || || || |||| | ||||| || ||||| ||
Sbjct 1015813 AAGCGTACGGCCATCTTCAAGTTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGG 1015754
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTG-CTTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064
|| || ||||| ||| ||| ||| || ||||| | || | ||||||| | || |
Sbjct 1015753 AATACCTTCCTTATCC-TGAATTTTTGTCTTGACATTGTCAATCGTGTCCGAAGATTCAA 1015695
Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| | || | || |||||||| || ||||| ||||||||||||||
Sbjct 1015694 CTTCTAATGTGATGGTCTTGCCGGTAAGTGTTTTGACAAAAATCTGCAT 1015646
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| || ||||| || | || | |||||||||||||| || |||||||| |
Sbjct 1015644 CCACCGCGCAACCGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGAC 1015585
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| || || || ||||| || ||| |||| | || ||||| || || ||
Sbjct 1015584 AGTGTGCGGCCGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGG 1015525
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTG-CTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064
|| || || || | | ||| | | || |||| |||| |||| || || | | ||| |
Sbjct 1015524 ATACCTTCTTTAT-CTTGAATCTTTGTTTTGACGTTG-TCGATCGTATCAGAAGACTCAA 1015467
Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| | || | ||||| ||||| | |||||||| ||||| |||||
Sbjct 1015466 CTTCTAATGTGATTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCAT 1015418
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
||||| || | ||| ||| || || || ||||| ||| | ||||| ||| ||
Sbjct 1015111 ACCAAGTGGAGGGTACTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCTTCA 1015052
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024
|||||||| |||||| | ||||| || || || || ||||| |||||||||||||| |
Sbjct 1015051 AGCTGTTTACCAGCGAAAATCAAGCGTTGTTGGTCTGGAGGGATGCCCTCCTTGTCTTGG 1014992
Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084
|| || ||| | | || | ||| || | |||||| || | ||| | || |||
Sbjct 1014991 ATCTTAGTCTTAACATTATCAATGGTATCGCTGGACTCGACCTCAAGGGTGATGGTCTTG 1014932
Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| ||||| || || || || ||||||||
Sbjct 1014931 CCAGTCAGGGTCTTGACGAAGATCTGCAT 1014903
>seq5
Length=1732373
Score = 89.7 bits (98), Expect = 5e-13
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
||||| ||||| ||||||| || |||||| ||| || ||||| ||||| ||| | |||
Sbjct 840094 TTTTGGATATTATAATCGCTCAAAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAAATC 840153
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045
|||||||| || || || || || |||||||||||| || || ||||| | ||
Sbjct 840154 AATCGCTGTTGGTCTGGCGGAATACCCTCCTTGTCCTGAATCTTGCTCTTGACATTATCA 840213
Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104
| || || | |||||| || | || | || |||||||| || || || || ||
Sbjct 840214 ATTGTATCGCTCGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTAACGAA 840272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500568193360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |