Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq9 129 5e-25
seq5 93.3 4e-14
>seq9
Length=1275601
Score = 129 bits (142), Expect = 5e-25
Identities = 171/233 (73%), Gaps = 6/233 (3%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || ||||| | || ||| || || || || || || || |||||||| || |||||
Sbjct 1015647 ATACCACCGCGCAACCGCAAAACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCA 1015588
Query 45171 CTGACGGTTTTAGAA--TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228
||| || | | || || | |||||| || ||| | || | ||||||||||| |
Sbjct 1015587 --GACAGTGTGCGGCCGTCCTCGAGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTG 1015530
Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGAC 45287
| || || ||||||||||||||||| ||| ||||| || | || | || || ||||||
Sbjct 1015529 GTGGGATACCTTCTTTATCTTGAATCTTTGTTTTGA-CGTTGTCGATCGTATCAGAAGAC 1015471
Query 45288 TCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| ||||| | || | ||||| ||||||| |||||||| |||||||||||
Sbjct 1015470 TCAACTTCTAATGTGATTGTTTTTCCGGTTAAGGTTTTTACGAAAATTTGCAT 1015418
Score = 109 bits (120), Expect = 5e-19
Identities = 156/220 (71%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || ||||| || | | || || || || || || ||||| || || || |||||
Sbjct 1015419 ATACCACCGCGAAGACGAAGGACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAATCC 1015360
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| ||| | ||| || | |||||| || ||| | ||||||||||||||||| ||
Sbjct 1015359 GAGAGGGTGCGACCATCCTCGAGTTGTTTACCAGCGAAGATCAATCGTTGCTGGTCGGGG 1015300
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| ||||||||||| || || || || ||| | || | ||| || |||||||||
Sbjct 1015299 GGGATGCCTTCTTTGTCCTGGATCTTGGTTTTCACATTGTCGATGGTATCAGAAGACTCG 1015240
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAA 45330
|| || || |||| || ||||| || ||||| || ||||
Sbjct 1015239 ACCTCAAGGGTAATAGTCTTGCCAGTAAGAGTCTTGACAA 1015200
>seq5
Length=1732373
Score = 93.3 bits (102), Expect = 4e-14
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 45151 CCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATA 45210
|||||||||||||||||||||| | || | ||| || | || ||||| ||| | |
Sbjct 840092 CCTTTTGGATATTATAATCGCTCAAAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAAA 840151
Query 45211 TCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTT 45270
||||||| || ||||| |||||||| || || || || ||||| || |||| |
Sbjct 840152 TCAATCGCTGTTGGTCTGGCGGAATACCCTCCTTGTCCTGAATCTTGCTCTTGACATTAT 840211
Query 45271 CTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAA 45330
| | || ||| |||||||| || ||||| | || |||||||| || || || || |
Sbjct 840212 CAATTGTATCGCTCGACTCGACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTAACGA 840271
Query 45331 A 45331
|
Sbjct 840272 A 840272
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452002979648440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |