Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq7 145 9e-30 seq6 140 4e-28 >seq7 Length=1353353 Score = 145 bits (160), Expect = 9e-30 Identities = 604/944 (64%), Gaps = 22/944 (2%) Strand=Plus/Minus Query 115659 TTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTT 115718 |||||||||||||||||| || ||||| || ||||| | || | | | | Sbjct 417269 TTGGGATTGATCGATGAAAGCACCACGATCTGCAGCCATCTGAACAATAGTCCGCTGAGA 417210 Query 115719 GATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTG 115778 |||||||| ||||| |||| ||| || || ||||| ||||||| |||||||| Sbjct 417209 AATTTCCCATACAGTCTTGTAAAGGGCTTTGATGTCATCGGGGATATTGGGAATATTTTG 417150 Query 115779 GATAGAGCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTT 115838 || |||||||| | || ||| ||| ||||| | | ||||| || |||| | Sbjct 417149 AATTGAGCCACCATCAGCGATGATGCGATTTTTCATGTTGTCAGACCAAAGTCCAAGGTC 417090 Query 115839 CTTGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCT 115898 ||||| | || || || ||||| || || || || ||| || | Sbjct 417089 AACAAGATCTTTCAGAAGCCATGGGTTAACAACTTGGAATTCTCCTGCAAGGACTCGCCG 417030 Query 115899 CAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGT 115958 |||||| || | ||||||||||||||||| || ||| || | ||||||| || Sbjct 417029 AGAATAGATATTTGAGGTGTATGGCTCAAAGCATTCGTTGAAGCCAAGGATTTGGCTGGT 416970 Query 115959 GGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCC-CTAATGC 116017 || |||||||| || || | ||||| |||||||| | ||| ||| | | Sbjct 416969 ACTAGCAGTGGGCATAGGGGCAACAAGAAGACTGTTGCGTACACCGTGTTTTGCTATTTC 416910 Query 116018 GTTCCTTGAGGGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTCCCACATATCAAA 116075 ||| || || | |||| || | | | || || | | ||| |||||||| | Sbjct 416909 TTTC-TTAAGAGAAACCCAATCCCAAAGGTCAGAAG-GTGTTACGTTCC-ACATATCATA 416853 Query 116076 CTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTC 116135 ||| | || || || || | || || || ||| |||| || |||||||| || || Sbjct 416852 CTGCAAAATTCCCTGAGAAACAGGAGAACCTTCATATGTTTCGTATGGGCCTTCGGTCTT 416793 Query 116136 CGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATT 116195 | | |||| || || ||||| || || || ||||||||||| || || ||| Sbjct 416792 TGAAAGTTCGCAGGATGCAGTCAGGGCGGCATGGTAAATTGTCTCAAAGATCTGAATATT 416733 Query 116196 CATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACG--GCACAAAATAAATACATCCGCG 116253 || ||| |||| ||| ||||| | | ||| | | || || |||| ||| Sbjct 416732 CAGCTGCTTAGCCTGAGAGGAGTCAAAAGGCAAACGTAGAGCCAAG--AAGGCATCAGCG 416675 Query 116254 AGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC 116313 || ||||| || || || ||||||||||||| | | ||| ||||||||| Sbjct 416674 AGTCCTTGAACCCCAAGAGCAATTGGGCGATGACGGAAGTTACTCTTTCGAGCTTCGGGA 416615 Query 116314 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 116373 ||||| || || |||| || | | | |||| ||| ||||| | |||| | Sbjct 416614 ACGGGGTAGTGGTTGTTATCAATGATCTTGTTTAAATTGCGCACCACAACTTGGGTGACT 416555 Query 116374 TCATGAAGCTTT------TCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGA 116427 | || | || ||||| || | ||| | | ||| || || | || Sbjct 416554 GCGTGCAATTTACCAAAGTCGTACTCG---CCGCGGATAGCGTCA---ACGTATGTTGGC 416501 Query 116428 AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 116487 | || | ||| || ||||| ||||| | | ||||| |||| ||||| |||||| Sbjct 416500 AAAGCAAGTGATGCTAGATTGCACACGGCGACTTCATCGGGGGCAGTATACTCAATAATT 416441 Query 116488 TCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 116547 |||||||| ||||| ||||| |||| || || | |||||| || || ||| ||| Sbjct 416440 TCCGTACATAAATTAGAACTTCTAATAGTTCCAAGGTTCTTCTGGTTGCTCTTCCGATTA 416381 Query 116548 CACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTG 116591 || ||||||||||| ||||| | || | || ||||| ||||| Sbjct 416380 CAGGCATCCTTGTAAAGCATGAAAGGATTTCCAGTCTCGGTTTG 416337 Score = 120 bits (132), Expect = 4e-22 Identities = 340/518 (66%), Gaps = 7/518 (1%) Strand=Plus/Minus Query 116703 GAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTT 116762 ||| || | ||||| | ||||||||| || | ||| | ||| || ||||||||| || Sbjct 416174 GAGTCCAGATGCCTCGTTTGGACAGAATAGTGTCCAATCGCCATTCTTCTCAACCCGTTT 416115 Query 116763 CATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATC 116822 |||||| | ||| || ||||||| || ||| ||||| || | ||||||| | Sbjct 416114 CATGAACAAGTCGGGAGTCCAGAGGGCGAGGAAAAGATCTCGGGCTCTCACTTCTTCTTT 416055 Query 116823 CCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTA 116882 || ||||| ||| | |||||||| || | | || | |||||| ||||| || || Sbjct 416054 ACCATGATTTTTACGGAGGTCCAAAAACTCAAATACGTCAGAGTGCCAAGGTTCAAGATA 415995 Query 116883 CACCGCGATTGACCCCTTGCGACGA---CCAGCCTGGTTTACATACCTCGCCGTTGCGTT 116939 | || | | || ||| | || |||| | ||||| || || || ||| Sbjct 415994 AATAGCAAAAGCACCAGGGCGTTTATTGCCGCCCTGATCCACATATCTGGCAGTATTGTT 415935 Query 116940 AAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAAT--ACGA 116997 ||| || |||||||| |||||||| |||| ||| ||||||||| || ||| | || Sbjct 415934 AAAGACACGAAGCATGGGAATGATCCCATTAGAGGAGCCATTTGTTCCTGCAATGTAGGA 415875 Query 116998 GACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATT 117057 | | |||| | | || ||| | || | ||||||||||| || ||| || || Sbjct 415874 GCCA-GTTG-CACGGATTCGGTGAACGTTGAGTCCAATACCCCCAGCAGTCTTGGAAATC 415817 Query 117058 TGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATG 117117 | || || | | || | | |||||||| || || || |||| | | || Sbjct 415816 AGAGCACATGTCTTCAGTGTATCATAGATCCCCTCAATACTATCCTCCTTCATATCAATA 415757 Query 117118 AGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCG 117177 ||||||||| | ||| ||||| ||||| || || ||||| || || || | ||| Sbjct 415756 AGGAAGCAGGAAGCCATCTGTGGTTGAGGTGTTCCCGCATTGAAAAGTGTGGGAGAAGCG 415697 Query 117178 TGGATGAACATACCTTGGGACATCTTATCGTAGGTCTC 117215 ||| | || | |||||||||| | ||| ||||| Sbjct 415696 TGGGTAAAAAATTTTTGGGACATCAGGTGGTATGTCTC 415659 >seq6 Length=1499889 Score = 140 bits (154), Expect = 4e-28 Identities = 302/452 (67%), Gaps = 10/452 (2%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 ||| || || || |||||||| || ||||| ||||| || | || ||| || ||||| Sbjct 77886 GTAATCGCCAACACGCTTCTCAAAAAAGTTGGTCTTGCCGGCAAGCGAGATGTTATCCAT 77945 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGCACCCCAATCTGTTTGAGG 127345 || || ||||||||| | ||||| || |||||| |||| | || Sbjct 77946 GAAGTCGAATGGGTTCGTGGAGTTATAATGTTTCTTGTTG-----CCAAGAGCTACAAGT 78000 Query 127346 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGG 127405 | || || | ||| |||| ||||| | ||||| || |||||||| || | ||| Sbjct 78001 AACCGGTCGGCTACGAACTCGATGTATTGGCACATCAACTTGGAGTTCATGCCAAGGAGA 78060 Query 127406 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATG 127465 |||||| || || ||| | ||| | | ||| || ||||| ||||| | ||| Sbjct 78061 GCACATGGAAGAGCATCCGTTAAGAATTCTTGCTCGATTTCCACGGCTTCAATGATGATT 78120 Query 127466 GCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGCAAAC 127525 || || || || | || | | ||| | |||||| |||||| Sbjct 78121 GCTGCAACAGCTTCTGGGCTGGGACGGTGGCGGAGGTGAGAGAAGAGGAGGCAAGCAAAG 78180 Query 127526 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 127585 || ||| |||||||||||||| ||||| || || || ||||| || || |||||| Sbjct 78181 TCAGTGTGAAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTAAGGCCAGGCATG 78240 Query 127586 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 127645 ||||| |||||||| ||||||||||| | | ||| || ||| ||||||||| ||||| Sbjct 78241 AGACCACGCTTCTTTAACCAGAAAATAGAAGCAAAAGAACCACTGAAGAAGATACCCTCA 78300 Query 127646 ACACACGCGAACGCAAATAGACGCTCGGCAAA 127677 ||| ||||| |||| ||||||| ||||| Sbjct 78301 ACAGCGGCGAAAGCAATAAGACGCTGTGCAAA 78332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506900915240