Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq9 111 4e-19 seq2 96.9 8e-15 >seq9 Length=1275601 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 199421 ACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCC 199480 ||||||||||| || ||||| ||||||| |||||| |||| || || | || || || Sbjct 1015626 ACAAGGTGGAGGGTAGACTCTTTTTGGATGTTGTAATCAGACAGTGTGCGGCCGTCCTCG 1015567 Query 199481 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGA 199540 || || || ||||||||||| || || |||||||| || || |||||| || ||| Sbjct 1015566 AGTTGTTTACCGGCGAAGATTAGGCGTTGCTGGTCTGGTGGGATACCTTCTTTATCTTGA 1015507 Query 199541 ATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTA 199600 |||||| || ||| |||| || || | | || || || || ||||| || || Sbjct 1015506 ATCTTTGTTTTGACGTTGTCGATCGTATCAGAAGACTCAACTTCTAATGTGATTGTTTTT 1015447 Query 199601 CCCGTGAGAGTTTTCACAAAAATTTG 199626 || || | ||||| || |||||||| Sbjct 1015446 CCGGTTAAGGTTTTTACGAAAATTTG 1015421 Score = 96.9 bits (106), Expect = 8e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||||||||||||||| |||||||| || | |||||| || | | || Sbjct 1015410 CGAAGACGAAGGACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAATCCGAGAGGGTG 1015351 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || || || || || |||||||| | || |||||||| || || ||| Sbjct 1015350 CGACCATCCTCGAGTTGTTTACCAGCGAAGATCAATCGTTGCTGGTCGGGGGGGATGCCT 1015291 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| ||||| ||||| ||||| |||| ||| || | | || || || | Sbjct 1015290 TCTTTGTCCTGGATCTTGGTTTTCACATTGTCGATGGTATCAGAAGACTCGACCTCAAGG 1015231 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 || || ||||| || || ||||| || |||| Sbjct 1015230 GTAATAGTCTTGCCAGTAAGAGTCTTGACAA 1015200 >seq2 Length=1931404 Score = 96.9 bits (106), Expect = 8e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| || || |||||||| |||| ||||||||| | | || | ||||| Sbjct 802220 AGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCC 802161 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 |||||||| || |||||||| || |||||||||||||| || Sbjct 802160 TCCAGCTGTTTGCCGGCGAAAATCAGACGCTGCTGGTCAGG 802120 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921010907613