Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq9 122 9e-23
seq6 114 1e-20
seq2 100 3e-16
seq5 82.4 8e-11
>seq9
Length=1275601
Score = 122 bits (134), Expect = 9e-23
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| ||||||||| | || |||||| ||| |
Sbjct 1014903 ATGCAGATCTTCGTCAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGTCCAGC 1014962
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | | |||| || |||| ||||| ||||| || || | ||||||
Sbjct 1014963 GATACCATTGATAATGTTAAGACTAAGATCCAAGACAAGGAGGGCATCCCTCCAGACCAA 1015022
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || | |||| ||| || |||||||| || || | ||||||||| ||||||||||
Sbjct 1015023 CAACGCTTGATTTTCGCTGGTAAACAGCTTGAAGATGGCCGCACCCTCTCCGACTACAAC 1015082
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||| ||||| || || || ||||| || ||
Sbjct 1015083 ATCCAGAAGGAGAGTACCCTCCACTTGGTCCTCCG 1015117
Score = 87.8 bits (96), Expect = 2e-12
Identities = 161/230 (70%), Gaps = 6/230 (3%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || ||||| || || ||||| |||||||| | || || || | |
Sbjct 1015646 ATGCAGATTTTTGTCAAAACACTTACCGGCAAGACCATCACATTAGAAGTTGAATCTTCG 1015705
Query 38304 GACA-GCGTGCAAACGCTTAAAGA-AAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | || || | | |||| |||||| | || || || || ||||| ||||||
Sbjct 1015706 GACACGATTGACAATG--TCAAGACAAAAATTCAGGATAAGGAAGGTATTCCACCCGACC 1015763
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
||||||| ||||| | || ||||| || || || || | || || || |||||||
Sbjct 1015764 AACAGCGCCTCATCTTTGCCGGCAAGCAACTTGAAGATGGCCGTACGCTTTCAGACTACA 1015823
Query 38422 ACATCCA-AAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
| ||||| |||| ||| || ||||| ||||| || | ||| | || ||
Sbjct 1015824 ATATCCAGAAAGAGAGC-ACTCTGCACTTGGTTTTGAGATTGCGTGGAGG 1015872
>seq6
Length=1499889
Score = 114 bits (126), Expect = 1e-20
Identities = 343/521 (66%), Gaps = 14/521 (3%)
Strand=Plus/Plus
Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650
||| || ||| |||||| || ||||| || ||||||||||| || || || || |
Sbjct 77868 CATGACACCAGCTTTTTGGTAATCGCCAACACGCTTCTCAAAAAAGTTGGTCTTGCCGGC 77927
Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTG---CTTGGTGCC 132707
| || ||| ||| || || || ||||| | | ||| || || |||| ||||
Sbjct 77928 AAGCGAGATGTTATCCATGAAGTCGAATGGGTTCGTGGAGTTATAATGTTTCTTGTTGCC 77987
Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCA 132767
| || | || || | || |||||| ||||||||||||||||| |||| | | |
Sbjct 77988 AAG-AGCT--ACAAGTAACCGGTCGGCTACGAACTCGATGTATTGGCACATCAACTTGGA 78044
Query 132768 ATTAAGTCCCAGCAGACGCACC-GGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGA 132826
|| | || || ||| |||| || || || || || | || ||||||||| | |
Sbjct 78045 GTTCATGCCAAGGAGA-GCACATGGAAGAGCATCCGTTAAGAATTCTTGCTCGATTTCCA 78103
Query 132827 CCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGA 132886
| || || ||| |||| | ||| | | ||| || || || | || ||
Sbjct 78104 CGGCTTCAATGATGATTGCTGCAACAGCTTCTGGGCTGGGACGGTGGCGGAGGTGAGAGA 78163
Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946
| | | |||||||||||| || | |||||||| | || || || |||||| ||
Sbjct 78164 AGAGGAGGCAAGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGA 78223
Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006
|||| | ||| |||||||| || || || || | ||| || || | || ||| ||
Sbjct 78224 AAGTAAGGCCAGGCATGAGACCACGCTTCTTTAACCAGAAAATAGAAGCAAAAGAACCAC 78283
Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT--C 133064
||||||| ||||| || || |||||||| | || |||| | || |||| || |
Sbjct 78284 TGAAGAAGATACCCTCAACAGCGGCGAAAGCAATAAGACGCTGTGCAAATGTGGATTCAC 78343
Query 133065 TTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTT 133105
| | ||| |||||| || | ||||| ||||| ||||||
Sbjct 78344 TATCCTG--GATCCATCGAATAGCCCAGTCGGC--TTTCTT 78380
>seq2
Length=1931404
Score = 100 bits (110), Expect = 3e-16
Identities = 90/112 (80%), Gaps = 1/112 (1%)
Strand=Plus/Plus
Query 38323 AAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGG 38382
||||||| || | ||||| ||||| || ||| | ||||| ||||| || |||| ||| |
Sbjct 802089 AAGAAAACCTC-TAGACAAGGAGGGCATCCCCCCTGACCAGCAGCGTCTGATTTTCGCCG 802147
Query 38383 GCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434
||||||||||||| || | ||||||||| |||||||||||||| |||||
Sbjct 802148 GCAAACAGCTGGAGGATGGCCGCACCCTCTCGGACTACAACATCCAGAAGGA 802199
>seq5
Length=1732373
Score = 82.4 bits (90), Expect = 8e-11
Identities = 130/183 (71%), Gaps = 4/183 (2%)
Strand=Plus/Minus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || ||||| ||||| |||||||| | || |||||| | | ||| | |
Sbjct 840272 TTCGTTAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCGAGCGATACAATT 840213
Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370
| || | | |||| || || | ||||| ||||| ||||| | |||||||||||
Sbjct 840212 GATAATG--TCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCGCCAGACCAACAGCGAT 840155
Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430
| |||| ||| || || ||||| || || | ||||| | | ||| || || |||||||
Sbjct 840154 TGATTTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACTTTGAGCGATTATAATATCCAAA 840095
Query 38431 AGG 38433
|||
Sbjct 840094 AGG 840092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172556165760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |