Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq9 102 3e-16 seq8 96.9 1e-14 seq5 93.3 2e-13 seq1 84.2 9e-11 >seq9 Length=1275601 Score = 102 bits (112), Expect = 3e-16 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106 || ||| | || ||||| || || |||||||| || || || || ||||| || || || Sbjct 1014900 ATTATGCAGATCTTCGTCAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGTCC 1014959 Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166 |||| |||||| | |||| || || ||||| ||||| || || ||||| || Sbjct 1014960 AGCGATACCATTGATAATGTTAAGACTAAGATCCAAGACAAGGAGGGCATCCCTCCAGAC 1015019 Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGG 391207 |||||||| || |||||| | || ||||| ||||||||||| Sbjct 1015020 CAACAACGCTTGATTTTCGCTGGTAAACAGCTTGAAGATGG 1015060 Score = 100 bits (110), Expect = 1e-15 Identities = 157/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || |||||||| || || || || || || | || |||||||| || Sbjct 1015646 ATGCAGATTTTTGTCAAAACACTTACCGGCAAGACCATCACATTAGAAGTTGAATCTTCG 1015705 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | | || ||||||||| ||||||||||| ||||| || || ||| Sbjct 1015706 GACACGATTGACAATGTCAAGACAAAAATTCAGGATAAGGAAGGTATTCCACCCGACCAA 1015765 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | || || | || || |||||||||||||| | || | | || || ||| Sbjct 1015766 CAGCGCCTCATCTTTGCCGGCAAGCAACTTGAAGATGGCCGTACGCTTTCAGACTACAAT 1015825 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | || || || || ||||| || || ||| || | ||| Sbjct 1015826 ATCCAGAAAGAGAGCACTCTGCACTTGGTTTTGAGATTGCGTGGA 1015870 Score = 89.7 bits (98), Expect = 2e-12 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| | || || ||||| || || | || ||||| || ||| Sbjct 1015418 ATGCAAATTTTCGTAAAAACCTTAACCGGAAAAACAATCACATTAGAAGTTGAGTCTTCT 1015477 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | ||| ||| ||||||||||| ||||| || || || || || Sbjct 1015478 GATACGATCGACAACGTCAAAACAAAGATTCAAGATAAAGAAGGTATCCCACCAGACCAG 1015537 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| |||| ||| | || |||||||| || || || | || || | ||||| || Sbjct 1015538 CAACGCCTAATCTTCGCCGGTAAACAACTCGAGGACGGCCGCACACTGTCTGATTACAAC 1015597 Query 391230 AT 391231 || Sbjct 1015598 AT 1015599 >seq8 Length=1298916 Score = 96.9 bits (106), Expect = 1e-14 Identities = 241/364 (66%), Gaps = 3/364 (1%) Strand=Plus/Plus Query 451242 CTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA 451301 |||| |||||||| || || ||||| | || || ||| ||||| || ||| || Sbjct 233720 CTCCCGAAGAAATCTCGTCGATGGTCTTGACCAAGATGCGTGAAACTGCCGAAGCTTACC 233779 Query 451302 TTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAAC 451361 |||| | || | |||| || |||| || || ||||| |||||||| | || | Sbjct 233780 TTGGCGGCACTGTCAACAATGCTGTCGTTACCGTCCCTGCTTACTTCAATGACTCTCAGC 233839 Query 451362 GGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421 | || || || || ||||| || | ||||| || | || ||||||||||| || || | Sbjct 233840 GTCAGGCCACCAAGGATGCTGGTCTGATTGCCGGCCTTAACGTTCTTCGAATCATCAACG 233899 Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaa 451481 | ||||| || |||||| | || || || || ||| || |||| | ||| | Sbjct 233900 AGCCTACTGCCGCTGCTATTGCGTACGG-CTTGGACAA--GAAAGCTGAGGGCGAACGCA 233956 Query 451482 aTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG 451541 || | | | |||||||| ||||| || ||| ||| |||| | | | || || | Sbjct 233957 ATGTCCTTATCTTTGATTTGGGTGGTGGTACTTTCGATGTTTCTCTTTTGACCATCGAGG 234016 Query 451542 ATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTG 451601 | || | ||||| || || | || |||||| || || | || ||||||||| | | Sbjct 234017 AGGGTATCTTTGAGGTCAAATCTACTGCTGGTGACACGCACTTGGGTGGTGAAGATTTCG 234076 Query 451602 ATAA 451605 | || Sbjct 234077 ACAA 234080 >seq5 Length=1732373 Score = 93.3 bits (102), Expect = 2e-13 Identities = 129/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 391059 TTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATT 391118 |||||||| || || || || || || || |||||||| || || || |||| ||| Sbjct 840272 TTCGTTAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCGAGCGATACAATT 840213 Query 391119 GAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTA 391178 || | | || || ||||| || ||||| || ||||| || || ||||| || || Sbjct 840212 GATAATGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCGCCAGACCAACAGCGATTG 840153 Query 391179 ATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAG 391238 |||||| | || || || ||||| ||||| | |||||| ||||||||||| | ||| Sbjct 840152 ATTTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACTTTGAGCGATTATAATATCCAAAAG 840093 Query 391239 G 391239 | Sbjct 840092 G 840092 >seq1 Length=3145143 Score = 84.2 bits (92), Expect = 9e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || ||||||||||| || |||||||| || ||||| || || || |||||||| Sbjct 232491 GCTGTTATTACTGTTCCAGCCTATTTCAACGACAACCAACGTCAGGCCACAAAAGATGCC 232432 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 || || ||||| | || ||||| || |||||||| || ||||| || ||||| | Sbjct 232431 GGTGCCATCGCTGGACTGAACGTTCTCCGTATTATTAACGAGCCTACTGCTGCTGCCATT 232372 Query 451442 GCATATGGA 451450 || |||||| Sbjct 232371 GCCTATGGA 232363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717412758212