Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq9 102 3e-16
seq8 96.9 1e-14
seq5 93.3 2e-13
seq1 84.2 9e-11
>seq9
Length=1275601
Score = 102 bits (112), Expect = 3e-16
Identities = 119/161 (74%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106
|| ||| | || ||||| || || |||||||| || || || || ||||| || || ||
Sbjct 1014900 ATTATGCAGATCTTCGTCAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGTCC 1014959
Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166
|||| |||||| | |||| || || ||||| ||||| || || ||||| ||
Sbjct 1014960 AGCGATACCATTGATAATGTTAAGACTAAGATCCAAGACAAGGAGGGCATCCCTCCAGAC 1015019
Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGG 391207
|||||||| || |||||| | || ||||| |||||||||||
Sbjct 1015020 CAACAACGCTTGATTTTCGCTGGTAAACAGCTTGAAGATGG 1015060
Score = 100 bits (110), Expect = 1e-15
Identities = 157/225 (70%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | ||||| || |||||||| || || || || || || | || |||||||| ||
Sbjct 1015646 ATGCAGATTTTTGTCAAAACACTTACCGGCAAGACCATCACATTAGAAGTTGAATCTTCG 1015705
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|| | ||||| | | || ||||||||| ||||||||||| ||||| || || |||
Sbjct 1015706 GACACGATTGACAATGTCAAGACAAAAATTCAGGATAAGGAAGGTATTCCACCCGACCAA 1015765
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| || | || || | || || |||||||||||||| | || | | || || |||
Sbjct 1015766 CAGCGCCTCATCTTTGCCGGCAAGCAACTTGAAGATGGCCGTACGCTTTCAGACTACAAT 1015825
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274
|| | || || || || ||||| || || ||| || | |||
Sbjct 1015826 ATCCAGAAAGAGAGCACTCTGCACTTGGTTTTGAGATTGCGTGGA 1015870
Score = 89.7 bits (98), Expect = 2e-12
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | |||||||| ||||| | || || ||||| || || | || ||||| || |||
Sbjct 1015418 ATGCAAATTTTCGTAAAAACCTTAACCGGAAAAACAATCACATTAGAAGTTGAGTCTTCT 1015477
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| || || | ||| ||| ||||||||||| ||||| || || || || ||
Sbjct 1015478 GATACGATCGACAACGTCAAAACAAAGATTCAAGATAAAGAAGGTATCCCACCAGACCAG 1015537
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||||| |||| ||| | || |||||||| || || || | || || | ||||| ||
Sbjct 1015538 CAACGCCTAATCTTCGCCGGTAAACAACTCGAGGACGGCCGCACACTGTCTGATTACAAC 1015597
Query 391230 AT 391231
||
Sbjct 1015598 AT 1015599
>seq8
Length=1298916
Score = 96.9 bits (106), Expect = 1e-14
Identities = 241/364 (66%), Gaps = 3/364 (1%)
Strand=Plus/Plus
Query 451242 CTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA 451301
|||| |||||||| || || ||||| | || || ||| ||||| || ||| ||
Sbjct 233720 CTCCCGAAGAAATCTCGTCGATGGTCTTGACCAAGATGCGTGAAACTGCCGAAGCTTACC 233779
Query 451302 TTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAAC 451361
|||| | || | |||| || |||| || || ||||| |||||||| | || |
Sbjct 233780 TTGGCGGCACTGTCAACAATGCTGTCGTTACCGTCCCTGCTTACTTCAATGACTCTCAGC 233839
Query 451362 GGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421
| || || || || ||||| || | ||||| || | || ||||||||||| || || |
Sbjct 233840 GTCAGGCCACCAAGGATGCTGGTCTGATTGCCGGCCTTAACGTTCTTCGAATCATCAACG 233899
Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaa 451481
| ||||| || |||||| | || || || || ||| || |||| | ||| |
Sbjct 233900 AGCCTACTGCCGCTGCTATTGCGTACGG-CTTGGACAA--GAAAGCTGAGGGCGAACGCA 233956
Query 451482 aTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG 451541
|| | | | |||||||| ||||| || ||| ||| |||| | | | || || |
Sbjct 233957 ATGTCCTTATCTTTGATTTGGGTGGTGGTACTTTCGATGTTTCTCTTTTGACCATCGAGG 234016
Query 451542 ATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTG 451601
| || | ||||| || || | || |||||| || || | || ||||||||| | |
Sbjct 234017 AGGGTATCTTTGAGGTCAAATCTACTGCTGGTGACACGCACTTGGGTGGTGAAGATTTCG 234076
Query 451602 ATAA 451605
| ||
Sbjct 234077 ACAA 234080
>seq5
Length=1732373
Score = 93.3 bits (102), Expect = 2e-13
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 391059 TTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATT 391118
|||||||| || || || || || || || |||||||| || || || |||| |||
Sbjct 840272 TTCGTTAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTCGAGTCGAGCGATACAATT 840213
Query 391119 GAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTA 391178
|| | | || || ||||| || ||||| || ||||| || || ||||| || ||
Sbjct 840212 GATAATGTCAAGAGCAAGATTCAGGACAAGGAGGGTATTCCGCCAGACCAACAGCGATTG 840153
Query 391179 ATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAG 391238
|||||| | || || || ||||| ||||| | |||||| ||||||||||| | |||
Sbjct 840152 ATTTTCGCCGGAAAGCAGCTTGAGGATGGTCGCACTTTGAGCGATTATAATATCCAAAAG 840093
Query 391239 G 391239
|
Sbjct 840092 G 840092
>seq1
Length=3145143
Score = 84.2 bits (92), Expect = 9e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381
|| || ||||||||||| || |||||||| || ||||| || || || ||||||||
Sbjct 232491 GCTGTTATTACTGTTCCAGCCTATTTCAACGACAACCAACGTCAGGCCACAAAAGATGCC 232432
Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441
|| || ||||| | || ||||| || |||||||| || ||||| || ||||| |
Sbjct 232431 GGTGCCATCGCTGGACTGAACGTTCTCCGTATTATTAACGAGCCTACTGCTGCTGCCATT 232372
Query 451442 GCATATGGA 451450
|| ||||||
Sbjct 232371 GCCTATGGA 232363
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975717412758212
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |