Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq8 129 4e-24
seq1 123 2e-22
seq3 100 2e-15
>seq8
Length=1298916
Score = 129 bits (142), Expect = 4e-24
Identities = 664/1043 (64%), Gaps = 17/1043 (2%)
Strand=Plus/Minus
Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333
||||||||||| || | ||| || |||||||| || ||||| || || | |||||||
Sbjct 234833 ATACCATTGGCGTCAACATCGAAAGTGACTTCGATCTGAGGAACACCACGGGGAGCAGGA 234774
Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393
|| || || | | ||| | || || || || || || ||| ||||||
Sbjct 234773 GGAATGCCAGTAAGTTCGAATTTACCGAGCAAGTTGTTGTCCTTGGTGCGAGCACGTTCA 234714
Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCT- 517452
|| ||| | | ||||| || ||| || || || || |||| | || | |||
Sbjct 234713 CCTTCGTAGACCTGGATCAAGACACCAGGCTGGTTGTCGGAGAAAGTAGAGAA-AGTCTC 234655
Query 517453 GGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGC 517512
||| || || || || || ||||| | | || | | |||||| | ||||| ||
Sbjct 234654 GGACTTCTTGGTTGGGATAGTGGTGTTGCGCTTGATGAGAGGGGTCATGACGCCACCAGC 234595
Query 517513 TGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTT 517570
|| || | || | |||||||| | || || | || | || | || | || ||
Sbjct 234594 AGTCTCGATGCCCAAGGAAAGAGGGGCAACGTCGAGAAGCAAGATTTCGTTGGTAGACTT 234535
Query 517571 TCATCA-GTTTGACCA-ACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 517628
| | || | ||| |||||| |||| || || | ||||||||| || ||||| || |
Sbjct 234534 GGAGGAAGTATCGCCAGACAAGA-TAGCAGCCTGGACAGCAGCACCGTAGGCAACGGCCT 234476
Query 517629 CATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTC 517688
| ||||| || | || | || | | || |||||||| || | || | | | ||
Sbjct 234475 CGTCAGGGTTGATAGACTTGTTGGGCTCCTTGCCATTGAAGAAGTCGGAGACCATCT-TC 234417
Query 517689 TT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTA 517747
| | ||| || ||||| | || || || || || || ||||| || || ||||||
Sbjct 234416 TGGATCTTGGGGATACGGGTAGAACCACCGACCAAGACGATTTCGTGGACGGAAGATTTA 234357
Query 517748 TCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCT 517807
|| | ||| | || | || ||||| || || | | | || | ||
Sbjct 234356 TCGATTTTAGCGTCACGGAGGACACGCTCAACAGGCTCCATGGTGGAACGGAAGAGATCC 234297
Query 517808 GAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-TCAATTCCTTCGA 517865
|||||||| ||||| || | ||| || || | || || |||| || |||
Sbjct 234296 TGGCAAAGTTCCTCGAAACGGGCACGAGT--GATGGAAGTGTAGAAGTCAACACCCTCGT 234239
Query 517866 ACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTT 517925
| | ||| || | |||||| | ||| || | | ||| || || | || || |||||||
Sbjct 234238 AGAGAGAGTCGATTTCAATAGAAGTCTGGGCAGCAGACGAGAGAGTGCGCTTGGCACGTT 234179
Query 517926 CACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATT--CAAATCTGTTTTATA 517983
| || || || | || | || | ||| || |||| || ||| | || |
Sbjct 234178 CGCAAGCAGTGCGGAGGCGGCGAAGGGCGCGAGC--ATTGGAGGACAGATCCTTCTTGTG 234121
Query 517984 TTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCC 518043
|| | |||||| || | ||| | | |||||||| || || ||||||||||| ||
Sbjct 234120 CTTACGCTTGAATTCGTTGACAAAGTGGTTGACAAGACGGTTGTCGAAATCTTCACCACC 234061
Query 518044 CAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAG 518103
||| | || | || | |||| | | || | || | || || || | | ||||||
Sbjct 234060 CAAGTGCGTGTCACCAGCAGTAGATTTGACCTCAAAGATACCCTCCTCGATGGTCAAAAG 234001
Query 518104 AGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG 518163
|| ||||| || |||||||||| |||||| ||||| ||||| ||| ||
Sbjct 234000 AGAAACATCGAAAGTACCACCACCCAAATCAAAGATAAGGACATTGCGTTCGCCCTCAGC 233941
Query 518164 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 518223
|| || || | || ||||||| |||||| ||||| || || || || |||| | |||
Sbjct 233940 TTTCTTGTCCAAGCCGTACGCAATAGCAGCGGCAGTAGGCTCGTTGATGATTCGAAGAAC 233881
Query 518224 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 518283
||||| || ||||| || ||||| || ||||| || | || || || || || ||
Sbjct 233880 GTTAAGGCCGGCAATCAGACCAGCATCCTTGGTGGCCTGACGCTGAGAGTCATTGAAGTA 233821
Query 518284 TGCAGGAACAGTAATAACGGCAT 518306
||||| || |||| || ||||
Sbjct 233820 AGCAGGGACGGTAACGACAGCAT 233798
>seq1
Length=3145143
Score = 123 bits (136), Expect = 2e-22
Identities = 192/274 (70%), Gaps = 9/274 (3%)
Strand=Plus/Minus
Query 518027 TCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCA 518086
|||||||||||||| ||||| | ||||| || | |||||| |||| |||| |||
Sbjct 1048163 TCAAAATCTTCACCACCCAAATGAGTATCACCAGCCGTAGCCAAGACTTCGAAAGCACCA 1048104
Query 518087 TCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACA 518146
| |||| || | || || |||||| ||| |||||||| | ||| | | ||
Sbjct 1048103 TTATCAATGGAAAGAACAGACACATCAAAGGTACCACCACCAAGATCGTACACAA----- 1048049
Query 518147 TTCATTTC---TTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 518203
| |||| || ||| | | ||||||||||| || |||| ||| || || || ||
Sbjct 1048048 -TGATTTGACGTTCGTCACCGGTCTTATCAAGACCGTAGGCAATAGCGGCGGCGGTAGGC 1047990
Query 518204 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 518263
||||| | || | | ||||| | ||| ||||| |||| ||||| || |||||||||
Sbjct 1047989 TCATTGACAACACGAAGGACATTCAAACCGGCAATAGTTCCGGCATCCTTGGTGGCTTGT 1047930
Query 518264 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAA 518297
||||| ||| || || || ||||| |||||||
Sbjct 1047929 CTTTGGTTATCATTGAAGTAGGCAGGGACAGTAA 1047896
Score = 100 bits (110), Expect = 2e-15
Identities = 144/202 (71%), Gaps = 7/202 (3%)
Strand=Plus/Plus
Query 518108 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTT 518167
||||| ||| |||||||||| ||| | || || |||||| ||| ||||| || ||
Sbjct 232292 ACATCGAAGGTACCACCACCCAAATCGTAGATGAGAACATTCCGTTCCTTGTC--GGATT 232349
Query 518168 TTATCAAGACCA-----TACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAA 518222
| || ||| || |||| ||||||||||| || || |||||||| | | ||
Sbjct 232350 TCCCGGAGCCCAATCCATAGGCAATGGCAGCAGCAGTAGGCTCGTTAATAATACGGAGAA 232409
Query 518223 CATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAAT 518282
| || || ||||| || || |||||||| ||||| || | ||| ||||| ||||
Sbjct 232410 CGTTCAGTCCAGCGATGGCACCGGCATCTTTTGTGGCCTGACGTTGGTTGTCGTTGAAAT 232469
Query 518283 ATGCAGGAACAGTAATAACGGC 518304
| || |||||||||||||| ||
Sbjct 232470 AGGCTGGAACAGTAATAACAGC 232491
>seq3
Length=1865056
Score = 100 bits (110), Expect = 2e-15
Identities = 121/165 (73%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 668855 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTGCACGT 668914
|||||||||||||| || || ||||||||||||||||||||| ||| | || || |||
Sbjct 703050 GGTAAAGAAGGTCGGCTTCGACAAAATTTGATGGGAAAACGTGTTGATTTTTCAGCCCGT 702991
Query 668915 ACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCTTATTATT 668974
|| ||||| || ||| |||||| | |||| | |||||||| ||||| | | ||||
Sbjct 702990 ACGGTTATAACGGGTGACCCCAATTTGTCTCTGGACGAAGTTGGCGTTCCCATCAGTATT 702931
Query 668975 GCTAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATT 669019
|| ||| || || | | ||| |||| || ||||||||
Sbjct 702930 GCGCAAACACTGACATATCCGGAAGTTGTTACCCCCTATAATATT 702886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780820464691534
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |