Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq8 441 9e-119 seq7 172 7e-38 seq1 165 1e-35 seq12 84.2 3e-11 >seq8 Length=1298916 Score = 441 bits (488), Expect = 9e-119 Identities = 1056/1582 (67%), Gaps = 19/1582 (1%) Strand=Plus/Minus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 |||||||| | || || ||||| || || | ||| |||||| ||||| || || Sbjct 234968 TCATCTTCGGCCTTGTATTTTTCAGCTTCAGCCAACATGCGTTCAATCTCTTCCTTGGAA 234909 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| || || || || |||||| | || || || | | |||| || | Sbjct 234908 AGACGACCCTTGTCGTTGGTGATAACAATCTTGTTGGTCTTGCCAGTGCCCTTCTCAAGA 234849 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 ||| || |||| |||||||| || ||||||||||| | || | || || || | Sbjct 234848 GCAGAGACGTTCATGATACCATTGGCGTCAACATCGAAAGTGACTTCGATCTGAGGAACA 234789 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | || || | ||||| || || | || ||| |||| || || |||| ||| | Sbjct 234788 CCACGGGGAGCAGGAGGAATGCCAGTAAGTTCGAATTTACCGAGCAAGTTGTTGTCCTTG 234729 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | |||||||||||| ||||| | || || |||| || || || Sbjct 234728 GTGCGAGCACGTTCACCTTCGTAGACCTGGATCAAGACACCAGGCTGGTTGTCGGAGAAA 234669 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || ||||| | | ||||| | ||| || || || || | | || | |||||| Sbjct 234668 GTAGAGAAAGTCTCGGACTTCTTGGTTGGGATAGTGGTGTTGCGCTTGATGAGAGGGGTC 234609 Query 6929 ATAATACCACCCATAGTTTCGA-GTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 || | ||||| ||| |||| | ||||| || ||||| | ||||| | || || | Sbjct 234608 ATGACGCCACCAGCAGTCTCGATGCCCAAG-GAAAGAGGGGCAACGTCGAGAAGCAAGAT 234550 Query 6988 GTCTTGAACAGATTCGTTCCCT---TCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCC 7044 || | ||| | | || || | ||||| || || ||||| | || || Sbjct 234549 TTCGTTGGTAGACTTGGAGGAAGTATCGCCAGACAAGATAGCAGCCTGGACAGCAGCACC 234490 Query 7045 GTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATC 7104 ||| || || ||||| || ||||| || | || || | || || || || || | || Sbjct 234489 GTAGGCAACGGCCTCGTCAGGGTTGATAGACTTGTTGGGCTCCTTGCCATTGAAGAAGTC 234430 Query 7105 CGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATT 7164 || | ||| | || || || ||||| || || || ||||||||||| |||||||| | Sbjct 234429 GGAGACCATCTTCTGGATCTTGGGGATACGGGTAGAACCACCGACCAAGACGATTTCGTG 234370 Query 7165 CACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTT 7224 || ||||||||||| || | ||| || || || ||||| ||||| Sbjct 234369 GACGGAAGATTTATCGATTTTAGCGTCACGGAGGACACGCTCAACAGGCTCCATGGTGGA 234310 Query 7225 ACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATC 7284 |||||| | ||| || |||||||| ||||| ||||| || ||||| || ||||| || Sbjct 234309 ACGGAAGAGATCCTGGCAAAGTTCCTCGAAACGGGCACGAGTGATGGAAGTGTAGAAGTC 234250 Query 7285 AACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCG 7344 ||| || ||||| | || || |||||||| | || || || | || || | || || Sbjct 234249 AACACCCTCGTAGAGAGAGTCGATTTCAATAGAAGTCTGGGCAGCAGACGAGAGAGTGCG 234190 Query 7345 CTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATC 7404 ||| || || || || || || || | || |||||||| || | || ||| | ||| Sbjct 234189 CTTGGCACGTTCGCAAGCAGTGCGGAGGCGGCGAAGGGCGCGAGCATTGGAGGACAGATC 234130 Query 7405 TTTCTTATGTTTACGTTTAAACTC-TTCAGAGAAGTG-TCGA-AGGAGTCTCGAATCGAA 7461 ||||| || ||||| || || || || | | ||||| | || | || | | ||||| Sbjct 234129 CTTCTTGTGCTTACGCTTGAATTCGTTGACA-AAGTGGTTGACAAGACGGTTG--TCGAA 234073 Query 7462 ATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTC 7521 |||||||||||||||||| || || || || || | |||||| ||||||||||| | || Sbjct 234072 ATCTTCACCACCCAAGTGCGTGTCACCAGCAGTAGATTTGACCTCAAAGATACCCTCCTC 234013 Query 7522 AATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CG 7580 ||| | || | |||||||| || ||||||||||||| ||||| || || || || || Sbjct 234012 GATGGTCAAAAGAGAAACATCGAAAGTACCACCACCCAAATCAAAGATAAGGACATTGCG 233953 Query 7581 TATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAA 7640 | ||| | || ||||| || | |||||||| ||||| || || || || || || | Sbjct 233952 T-TCGCCCTCAGCTTTCTTGTCCAAGCCGTACGCAATAGCAGCGGCAGTAGGCTCGTTGA 233894 Query 7641 TAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCG 7700 | || |||||| ||| ||||| ||||| | ||||| || || || || || || | Sbjct 233893 TGATTCGAAGAACGTTAAGGCCGGCAATCAGACCAGCATCCTTGGTGGCCTGACGCTGAG 233834 Query 7701 AATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACG 7760 | || || ||||| || ||||| || ||||| || | |||| | || || || | Sbjct 233833 AGTCATTGAAGTAAGCAGGGACGGTAACGACAGCATTGTTGACAGTGCCGCCAAGGTAAG 233774 Query 7761 ATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACT 7820 ||| || | || ||| ||||| | |||||||| || || ||||| | | || | Sbjct 233773 CTTCGGCAGTTTCACGCATCTTGGTCAAGACCATCGACGAGATTTCTTCGGGAGTGAATT 233714 Query 7821 GTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAA 7880 | ||| || || || || || || | || | |||||| ||| || | ||| | Sbjct 233713 GCTTCTCCTCGCCCTTGAACTCGACCTGGATGACGGGTTT-GCCG--GCTTTGTCGATGA 233657 Query 7881 CCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGA 7940 ||| | | | | |||||||| | ||||| | || || || | |||| Sbjct 233656 TCTTGAAGGGGAAGTGCTTCATATCAGCCTGGACTTCAGCATCGTTGAATTTGCGGCCGA 233597 Query 7941 TAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCG 8000 ||||||| |||||||| ||||| |||||| ||||||||||||| ||||||||| || | Sbjct 233596 TAAGACGTTTTGCATCGAAAACAGTGTTTGTGGGGTTCATGGCGACTTGGTTCTTTGCGG 233537 Query 8001 CGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGAT 8060 | || ||||| | || || || || || || || ||| | || || || || || | Sbjct 233536 CATCACCGATCAAGCGCTCGGTA---TCTGTGAAAGCCACGAAAGAGGGCGTAGTACGGT 233480 Query 8061 TCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAAT 8120 | || |||||||| || |||||||| | |||||| | | ||| || ||||| || | Sbjct 233479 TACCCTGGTCGTTGGCGATAATTTCAATGCGGTCATCACGAAAGATACCCACGCAGGAGT 233420 Query 8121 ACGTTGTTCCTAAATCAATACC 8142 | || || || | ||| ||||| Sbjct 233419 ATGTCGTGCCCAGATCGATACC 233398 >seq7 Length=1353353 Score = 172 bits (190), Expect = 7e-38 Identities = 454/690 (66%), Gaps = 15/690 (2%) Strand=Plus/Minus Query 105472 TCGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCCTGATCAGGA 105531 ||||| || | || || || | ||||| || || | || || ||||| | ||| Sbjct 416212 TCGTATAGCTGCTCGAATTCGTCTCCGTAGACATCGGCGAGTCCAGATGCCTCGTTTGGA 416153 Query 105532 CAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCAC 105591 || || | || ||||| |||| ||||| |||||||||||||| || ||| |||| Sbjct 416152 CAGAATAGTGTCCAATCGCCATTCTTCTCAACCCGTTTCATGAACAAGTCGGGAGTCCAG 416093 Query 105592 ATGGCT--GAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTT 105649 | ||| ||||||| ||||| ||| | ||||| | ||| ||||| ||| | | Sbjct 416092 AGGGCGAGGAAAAGA--TCTCGGGCTCTCACTTCTTCTTTACCATGATTTTTACGGAGGT 416035 Query 105650 CGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCC----- 105704 | | ||| || | | || | |||||| ||||| | ||| | |||| || || Sbjct 416034 CCAAAAACTCAAATACGTCAGAGTGCCAAGGTTCAAGATAAATAGCAAAAGCACCAGGGC 415975 Query 105705 -TTTAC-GACGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATT 105762 |||| | ||||| |||| |||||||| || || |||| | || || | ||| Sbjct 415974 GTTTATTGCCGCCC----TGATCCACATATCTGGCAGTATTGTTAAAGACACGAAGCATG 415919 Query 105763 GGAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACA 105822 ||||| || |||| || | ||||||||||| ||| | || | ||||||| | Sbjct 415918 GGAATGATCCCATTAGAGGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTTGCACGGATT 415859 Query 105823 TCGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACT 105882 |||||||| | |||||||||||||| ||| || | ||||| || | | Sbjct 415858 CGGTGAACGTTGAGTCCAATACCCCCAGCAGTCTTGGAAATCAGAGCACATGTCTTCAGT 415799 Query 105883 GTATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATT 105942 ||||| || || || || |||||||| ||||| | |||| ||||| || || | ||| Sbjct 415798 GTATCATAGATCCCCTCAATACTATCCTCCTTCATATCAATAAGGAAGCAGGAAGCCATC 415739 Query 105943 TGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGAATGAACAAACCTTTC 106002 |||||| ||||| || |||||||| || || || | || || | || || || Sbjct 415738 TGTGGTTGAGGTGTTCCCGCATTGAAAAGTGTGGGAGAAGCGTGGGTAAAAAATTTTTGG 415679 Query 106003 GATAACGCTTCGTATGTTTCCAGGACGTGATCAATATCGTGTCCATGAATACCAATAGCG 106062 || | | | |||||| || | | | |||||| || | ||||||||||| || Sbjct 415678 GACATCAGGTGGTATGTCTCAATCGCTTTATCAATGTCCTCATGATGAATACCAACGGCA 415619 Query 106063 ACGCGCATATAGAGATATTGGGGTGTTTCAATAATTTCACCGTCAATTTTCTGGAGATAC 106122 ||||||||| | || || || |||| || || |||| ||| | | |||||| Sbjct 415618 ACGCGCATAATCATATGCTGCGGACGTTCAGCAACTTTGCCGTTGATTCTTAGTAGATAC 415559 Query 106123 CCTTTTTCAAGTGTTTTTAAACCAAAATAC 106152 | || ||||| || || ||||| ||| Sbjct 415558 GACCTCTCCAGTGTCTTGAACCCAAAGTAC 415529 Score = 93.3 bits (102), Expect = 5e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 105220 TCAACGTATTTTGGTAACGCGATTGATGCGAGATTACATACGGCGGTTTCTTCCTTATCC 105279 ||||||||| |||| || || | |||||| ||||| || |||||| ||| || | Sbjct 416515 TCAACGTATGTTGGCAAAGCAAGTGATGCTAGATTGCACACGGCGACTTCATCGGGGGCA 416456 Query 105280 GTAAACTCCAGAATTTCTGTACACAAATTTGATGATTTAATCGTACCAACGTGTTTATGG 105339 ||| |||| | |||||| ||||| ||||| || | |||| || |||| || || ||| Sbjct 416455 GTATACTCAATAATTTCCGTACATAAATTAGAACTTCTAATAGTTCCAAGGTTCTTCTGG 416396 Query 105340 TTCGACTTTTCATTACACGCGTCTTTGTAAAGCATATATGGGGTTCCCGTTTCACTTTG 105398 || ||| |||||| || || ||||||||||| | || |||| || || |||| Sbjct 416395 TTGCTCTTCCGATTACAGGCATCCTTGTAAAGCATGAAAGGATTTCCAGTCTCGGTTTG 416337 >seq1 Length=3145143 Score = 165 bits (182), Expect = 1e-35 Identities = 264/373 (71%), Gaps = 17/373 (5%) Strand=Plus/Minus Query 7444 AAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGAC 7503 || || |||| || ||||||||||||||||| || ||||| || || || || ||| Sbjct 1048176 AATGACTCTCTGGTCAAAATCTTCACCACCCAAATGAGTATCACCAGCCGTAGCCAAGAC 1048117 Query 7504 TTCAAAGATACCTCCTTCAATGTTTAACAAC-GAAACATCAAACGTACCACCACCCAG-- 7560 ||| || ||| |||||| || ||| || |||||||| ||||||||||| || Sbjct 1048116 TTCGAAAGCACCATTATCAATGGA-AAGAACAGACACATCAAAGGTACCACCACCAAGAT 1048058 Query 7561 -GTCAAAAATGAGT--ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGAT 7617 || | ||||| | |||| ||||| | ||||||| |||||||| || || Sbjct 1048057 CGTACACAATGATTTGACGT--------TCGTCACCGGTCTTATCAAGACCGTAGGCAAT 1048006 Query 7618 AGCCGCCGCCGTTGGTTCATTAATAATACGAA-GACAGTTCAGGCCAGCAATAGTTGCCG 7676 ||| || || || || ||||| | || ||||| |||| |||| || ||||||||| | | Sbjct 1048005 AGCGGCGGCGGTAGGCTCATTGACAACACGAAGGACA-TTCAAACCGGCAATAGTTCCGG 1047947 Query 7677 CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGT 7736 |||| || || ||||||| ||| ||| || |||||||| ||||| || ||||| ||| Sbjct 1047946 CATCCTTGGTGGCTTGTCTTTGGTTATCATTGAAGTAGGCAGGGACAGTAACGACAGCGC 1047887 Query 7737 CCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCG 7796 |||||| || || || ||| || || || || |||||||| | |||||| | Sbjct 1047886 TGGTGACTGGTTTGCCTAGGTACCCCTCGGCAATTTCCTTCATTTTACCCAAAACCATGG 1047827 Query 7797 ATGAAATCTCTTC 7809 || | |||||| Sbjct 1047826 CAGACACCTCTTC 1047814 Score = 147 bits (162), Expect = 3e-30 Identities = 325/485 (67%), Gaps = 3/485 (1%) Strand=Plus/Plus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || ||||| ||||| || ||||| || | | ||||| | || ||| | | ||| Sbjct 231998 AGGTCCTCGAAACGAGCGCGGGTGATTTGAGAAGCAAAATCCTCTCCATCGAAGAGGGAA 232057 Query 7304 TCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCC 7363 ||||| |||| | ||||| | | ||| | || ||||| || ||||| || || Sbjct 232058 TCAATCTCAACCATGGTTTGAGTTGCGTTAGAAAGGGTGCGCTTGGCACGCTCGCAAGCA 232117 Query 7364 GTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTA 7423 ||||| | || || |||||||| | | ||| |||| ||| ||||| || || | Sbjct 232118 GTTCGGAGGCGGCGGAGGGCACGGGCATCACCAGAAAGATCCTTCTTGGTCTTGCGCTGG 232177 Query 7424 AACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTA 7483 || |||| ||| || |||||| | | ||||||||| | |||||| | || ||| Sbjct 232178 AATTCTTTCTTGAAATGATCAAGGAGGTTGGTATCGAAATCCTGACCACCAAGATGAGTA 232237 Query 7484 TCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCA 7543 || || || || || ||||| |||| || || | |||||| | | |||||||| Sbjct 232238 TCACCAGCAGTAGCCTTGACAGTGAAGACGCCACCCTGAATGTTGAGGAGGGAAACATCG 232297 Query 7544 AACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CGT--ATCGTCGTCTTTGTTCTTA 7600 || ||||||||||||| || | ||||| || || ||| | |||| ||| Sbjct 232298 AAGGTACCACCACCCAAATCGTAGATGAGAACATTCCGTTCCTTGTCGGATTTCCCGGAG 232357 Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660 | | || || || || || || || || || || ||||||||||| ||| |||||| Sbjct 232358 CCCAATCCATAGGCAATGGCAGCAGCAGTAGGCTCGTTAATAATACGGAGAACGTTCAGT 232417 Query 7661 CCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGG 7720 ||||| || | | |||||||| || || || ||||| ||||| || ||||| || Sbjct 232418 CCAGCGATGGCACCGGCATCTTTTGTGGCCTGACGTTGGTTGTCGTTGAAATAGGCTGGA 232477 Query 7721 ACCGT 7725 || || Sbjct 232478 ACAGT 232482 >seq12 Length=982140 Score = 84.2 bits (92), Expect = 3e-11 Identities = 142/203 (70%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 11442 TCTTTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACG 11501 |||| ||| ||||| ||||| ||||| || || ||||| || || || |||| || Sbjct 522015 TCTTGACTTGCCAATGGCATCGATTTCGTCAATGAAGATTATGCAAGGAGTGTTTTTTCG 521956 Query 11502 TGCCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAA 11561 || | | || | |||||| || | || || || || ||||||||||| ||||| Sbjct 521955 CGCGTTTGCGAAAAGATCACGAACACGAGATGGCCCAACACCAACAAACATTTCCACGAA 521896 Query 11562 CGATG-ACCCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTA 11620 | || ||| | || ||||| ||| |||||| ||| || || ||| | || |||| Sbjct 521895 CTCTGAACCGCTGACGCTGAA-AAATGGAACGCCAGACTCGCCGGCTGTGGCCTTCGCTA 521837 Query 11621 AAAGTGTTTTACCTGTACCTGGT 11643 ||||| ||||| ||||||||| Sbjct 521836 GTAGTGTCTTACCGGTACCTGGT 521814 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132490372760