Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq6 150 2e-31 seq12 91.5 2e-13 >seq6 Length=1499889 Score = 150 bits (166), Expect = 2e-31 Identities = 349/518 (67%), Gaps = 16/518 (3%) Strand=Plus/Minus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCG 102169 |||||| || |||| |||||||| || |||||||| | | | ||| || | | | Sbjct 78396 AGTTCCTTGCATTCGCAAGAAAGCCGACTGGGCTAT----TCGATGGATCCAGGATAGTG 78341 Query 102170 T-TCC---TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225 ||| ||||| |||| || | || || || ||||||||||||||||||| || Sbjct 78340 AATCCACATTTGCACAGCGTCTTATTGCTTTCGCCGCTGTTGAGGGTATCTTCTTCAGTG 78281 Query 102226 GTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTC 102284 |||| || ||| |||||| ||| | |||||||| ||||||||||| || || ||| Sbjct 78280 GTTCTTT-TGCTTCTATTTTCTGGTTAAAGAAGCGTGGTCTCATGCCTGGCCTTACTTTC 78222 Query 102285 TCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTTTTC 102344 ||||||||||| ||||||||||||||||| || ||| || ||||| || ||| Sbjct 78221 TCCAACGAGCTGATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCTTGCCTCCTCTTC 78162 Query 102345 AAATTATTGCGTATTAAACCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCGTT 102404 | || || | | || || || | || | | |||||||| Sbjct 78161 TCTCACCTCCGCCACCGTCCCAGCCCAGAAGCTGTTGCAGCAATCATCATTGAAGCCGTG 78102 Query 102405 GAGATTGAGAAGGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCT 102464 || || ||| | | |||| || |||||| |||||||| |||||| | || ||||| || Sbjct 78101 GAAATCGAGCAAGAATTCTTAACGGATGCTCTTCCATGTGCTCTCCTTGGCATGAACTCC 78042 Query 102465 GAAAAGATGTCCGAATATATTGAGTATGTATCTGATAGATT-GTTGAAGCAGATCGGGGT 102523 | ||||| | |||| || |||| ||| | || | || ||| ||| || || Sbjct 78041 AAGTTGATGTGCCAATACATCGAGTTCGTAGCCGACCGGTTACTTGTAGC---TCTTGGC 77985 Query 102524 GCCTCCAA--TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGAC 102581 | || || ||||||| ||| ||||| ||||||||||| ||||| || | | Sbjct 77984 AACAAGAAACATTATAACTCCACGAACCCATTCGACTTCATGGATAACATCTCGCTTGCC 77925 Query 102582 GGGAAGACAAACTTCTTCGAAAAGAGGGTTGGGGACTA 102619 || ||||| ||||| || || ||| | ||||| || || Sbjct 77924 GGCAAGACCAACTTTTTTGAGAAGCGTGTTGGCGATTA 77887 >seq12 Length=982140 Score = 91.5 bits (100), Expect = 2e-13 Identities = 165/237 (70%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 16055 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 16114 ||| || | |||||| || || |||||||||| ||||| || |||| || ||| Sbjct 522009 CTTGCCAATGGCATCGATTTCGTCAATGAAGATTATGCAAGGAGTGTTTTTTCGCGCGTT 521950 Query 16115 TTCAAAGAGATCCCGTACACGCT-TGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 16173 | | || ||||| || ||||| |||| || |||||||||||||| ||||| || | || Sbjct 521949 TGCGAAAAGATCACGAACACGAGATGGC-CCAACACCAACAAACATTTCCACGAACTCTG 521891 Query 16174 --CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAG 16231 | || || | || || || || ||| || || || |||| || || || Sbjct 521890 AACCGCTGACGCT--GAAAAATGGAACGCCAGACTCGCCGGCTGTGGCCTTCGCTAGTAG 521833 Query 16232 AGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 |||||||| |||||||| || | ||||| ||||| || |||||||| ||||| Sbjct 521832 TGTCTTACCGGTACCTGGTGGGCCAGAGAGGATAGCACCGCGGGGAATCTTAGCGCC 521776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742097388080