Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq6 150 2e-31
seq12 91.5 2e-13
>seq6
Length=1499889
Score = 150 bits (166), Expect = 2e-31
Identities = 349/518 (67%), Gaps = 16/518 (3%)
Strand=Plus/Minus
Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCG 102169
|||||| || |||| |||||||| || |||||||| | | | ||| || | | |
Sbjct 78396 AGTTCCTTGCATTCGCAAGAAAGCCGACTGGGCTAT----TCGATGGATCCAGGATAGTG 78341
Query 102170 T-TCC---TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 102225
||| ||||| |||| || | || || || ||||||||||||||||||| ||
Sbjct 78340 AATCCACATTTGCACAGCGTCTTATTGCTTTCGCCGCTGTTGAGGGTATCTTCTTCAGTG 78281
Query 102226 GTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTC 102284
|||| || ||| |||||| ||| | |||||||| ||||||||||| || || |||
Sbjct 78280 GTTCTTT-TGCTTCTATTTTCTGGTTAAAGAAGCGTGGTCTCATGCCTGGCCTTACTTTC 78222
Query 102285 TCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCGGTGGAACTTTTC 102344
||||||||||| ||||||||||||||||| || ||| || ||||| || |||
Sbjct 78221 TCCAACGAGCTGATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCTTGCCTCCTCTTC 78162
Query 102345 AAATTATTGCGTATTAAACCAACGACTGAGACTATTCATTCTATTGTTAAGGAAGCCGTT 102404
| || || | | || || || | || | | ||||||||
Sbjct 78161 TCTCACCTCCGCCACCGTCCCAGCCCAGAAGCTGTTGCAGCAATCATCATTGAAGCCGTG 78102
Query 102405 GAGATTGAGAAGGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGAATTCT 102464
|| || ||| | | |||| || |||||| |||||||| |||||| | || ||||| ||
Sbjct 78101 GAAATCGAGCAAGAATTCTTAACGGATGCTCTTCCATGTGCTCTCCTTGGCATGAACTCC 78042
Query 102465 GAAAAGATGTCCGAATATATTGAGTATGTATCTGATAGATT-GTTGAAGCAGATCGGGGT 102523
| ||||| | |||| || |||| ||| | || | || ||| ||| || ||
Sbjct 78041 AAGTTGATGTGCCAATACATCGAGTTCGTAGCCGACCGGTTACTTGTAGC---TCTTGGC 77985
Query 102524 GCCTCCAA--TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGCCTCGAC 102581
| || || ||||||| ||| ||||| ||||||||||| ||||| || | |
Sbjct 77984 AACAAGAAACATTATAACTCCACGAACCCATTCGACTTCATGGATAACATCTCGCTTGCC 77925
Query 102582 GGGAAGACAAACTTCTTCGAAAAGAGGGTTGGGGACTA 102619
|| ||||| ||||| || || ||| | ||||| || ||
Sbjct 77924 GGCAAGACCAACTTTTTTGAGAAGCGTGTTGGCGATTA 77887
>seq12
Length=982140
Score = 91.5 bits (100), Expect = 2e-13
Identities = 165/237 (70%), Gaps = 6/237 (3%)
Strand=Plus/Minus
Query 16055 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 16114
||| || | |||||| || || |||||||||| ||||| || |||| || |||
Sbjct 522009 CTTGCCAATGGCATCGATTTCGTCAATGAAGATTATGCAAGGAGTGTTTTTTCGCGCGTT 521950
Query 16115 TTCAAAGAGATCCCGTACACGCT-TGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 16173
| | || ||||| || ||||| |||| || |||||||||||||| ||||| || | ||
Sbjct 521949 TGCGAAAAGATCACGAACACGAGATGGC-CCAACACCAACAAACATTTCCACGAACTCTG 521891
Query 16174 --CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAG 16231
| || || | || || || || ||| || || || |||| || || ||
Sbjct 521890 AACCGCTGACGCT--GAAAAATGGAACGCCAGACTCGCCGGCTGTGGCCTTCGCTAGTAG 521833
Query 16232 AGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288
|||||||| |||||||| || | ||||| ||||| || |||||||| |||||
Sbjct 521832 TGTCTTACCGGTACCTGGTGGGCCAGAGAGGATAGCACCGCGGGGAATCTTAGCGCC 521776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742097388080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |