Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017-
06-05] 39 sequences; 21,865,028 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq7 158 1e-33
seq6 111 2e-19
seq2 86.0 7e-12
seq13 84.2 3e-11
>seq7
Length=1353353
Score = 158 bits (174), Expect = 1e-33
Identities = 398/600 (66%), Gaps = 5/600 (1%)
Strand=Plus/Minus
Query 110532 CTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGA 110591
||| ||||| | |||||| ||||| | || || |||| || |||||||| || |
Sbjct 416201 CTCGAATTCGTCTCCGTAGACATCGGCGAGTCCAGATGCCTCGTTTGGACAGAATAGTGT 416142
Query 110592 CCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAA 110651
||||| ||| || |||||||| |||||||||| ||| ||| |||| | || |||
Sbjct 416141 CCAATCGCCATTCTTCTCAACCCGTTTCATGAACAAGTCGGGAGTCCAGAGGGCGAGGAA 416082
Query 110652 AAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCAT 110711
||| || ||| | | ||||| | ||| || || || || |||||||| || |
Sbjct 416081 AAGATCTCGGGCTCTCACTTCTTCTTTACCATGATTTTTACGGAGGTCCAAAAACTCAAA 416022
Query 110712 GATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACGAC--CCGCC 110769
| || |||||||| ||||| ||||| | ||| | | || || | |||||
Sbjct 416021 TACGTCAGAGTGCCAAGGTTCAAGATAAATAGCAAAAGCACCAGGGCGTTTATTGCCGCC 415962
Query 110770 -TGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGA 110828
|| | ||||| | || || || ||||| | ||||| ||||| || |||| ||
Sbjct 415961 CTGATCCACATATCTGGCAGTATTGTTAAAGACACGAAGCATGGGAATGATCCCATTAGA 415902
Query 110829 TTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACC 110888
|||||||| || ||| ||| | | ||||| || ||| | | | ||
Sbjct 415901 GGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTTGCACGGATTCGGTGAACGTTGAGTCC 415842
Query 110889 AATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGAGTGTACCATAAATACCAT 110947
|||||| || || ||| ||| | ||||| ||| | |||||| |||| || || |
Sbjct 415841 AATACCCCCAGCAGTCTTGGAAATCAGAGCACATGTCT-TCAGTGTATCATAGATCCCCT 415783
Query 110948 CAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTC 111007
|||| ||| |||| | |||| || ||||| |||| |||||| || |||| ||||
Sbjct 415782 CAATACTATCCTCCTTCATATCAATAAGGAAGCAGGAAGCCATCTGTGGTTGAGGTGTTC 415723
Query 111008 CCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTATG 111067
|||||||||| ||||| || | || || | || | |||||||||| || |||||
Sbjct 415722 CCGCATTGAAAAGTGTGGGAGAAGCGTGGGTAAAAAATTTTTGGGACATCAGGTGGTATG 415663
Query 111068 TGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATAT 111127
| || | || | || | | |||||||||| |||||| ||||| | |||||
Sbjct 415662 TCTCAATCGCTTTATCAATGTCCTCATGATGAATACCAACGGCAACGCGCATAATCATAT 415603
>seq6
Length=1499889
Score = 111 bits (122), Expect = 2e-19
Identities = 299/451 (66%), Gaps = 10/451 (2%)
Strand=Plus/Plus
Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267
|| || || || | ||| || || || || ||||| || | || |||||||| |||||
Sbjct 77887 TAATCGCCAACACGCTTCTCAAAAAAGTTGGTCTTGCCGGCAAGCGAGATGTTATCCATG 77946
Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAGA-TTGGTGGTTGACCAACTTGTTTCAGAAGACG 119326
||||| || || || ||||||| | || | |||| |||| | || | ||
Sbjct 77947 AAGTCGAATGGGTTCGTGGAGTTATAATGTTTCTTGTTG-CCAAGAGCTACAAGTAACCG 78005
Query 119327 ATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTACA 119386
|||| || ||||||| |||| | ||||| | || ||||| || | |||| |||
Sbjct 78006 GTCGGCTACGAACTCGATGTATTGGCACATCAACTTGGAGTTCATGCCAAGGAGAGCACA 78065
Query 119387 CGGGAGAGCATCGAGGATGAAGTTCTT-CTCGATCTCCACAGCTTCTTTCACGATGGAGT 119445
|| |||||||| | ||| ||||| |||||| ||||| ||||| | | ||| |
Sbjct 78066 TGGAAGAGCATCCGTTAAGAA-TTCTTGCTCGATTTCCACGGCTTCAATGATGATTGCTG 78124
Query 119446 GAATAGTTTCTGTCGATGGTTTGTTTCTCAAGAGTTTAAACAACTCTACG---GCAAATT 119502
|| || ||||| || || | ||| | | | || | | ||||| |
Sbjct 78125 CAACAGCTTCTGGGCTGGGACGGTGGCG---GAGGTGAGAGAAGAGGAGGCAAGCAAAGT 78181
Query 119503 CTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGA 119562
| ||||| || || || |||||||| ||||| || ||| ||| ||||||||||
Sbjct 78182 CAGTGTGAAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTAAGGCCAGGCATGA 78241
Query 119563 GTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCA 119622
| || | ||||||| ||| || || | | |||| ||| |||||||| ||||| |
Sbjct 78242 GACCACGCTTCTTTAACCAGAAAATAGAAGCAAAAGAACCACTGAAGAAGATACCCTCAA 78301
Query 119623 CACAGGCGAAAGCGAATAGACGCTCAGCAAA 119653
|| ||||||||| | ||||||| |||||
Sbjct 78302 CAGCGGCGAAAGCAATAAGACGCTGTGCAAA 78332
>seq2
Length=1931404
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
|||||||||||||||||||||||||||| |||||||||||||| | |||||| || |
Sbjct 1804887 ATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGAGAGTTCGACCCTCTC 1804828
Query 136776 TGGGAACAGCTT 136787
||||| ||| ||
Sbjct 1804827 TGGGACCAGTTT 1804816
>seq13
Length=857040
Score = 84.2 bits (92), Expect = 3e-11
Identities = 61/71 (86%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||| ||||||||||||||| |||||||| |||||||||| ||| |||||||| ||||
Sbjct 614133 ATAACTCAGTTGGTTAGAGTGTGGTGCTAATAACGCCAAAGTCGAGGGTTCGACCCCCTC 614074
Query 136776 TGGGAACAGCT 136786
||||| |||||
Sbjct 614073 TGGGACCAGCT 614063
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975712874200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |