Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophidiomyces_20ophiodiicola_20[genbank_20GCA_5F002167195.1_202017- 06-05] 39 sequences; 21,865,028 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq7 158 1e-33 seq6 111 2e-19 seq2 86.0 7e-12 seq13 84.2 3e-11 >seq7 Length=1353353 Score = 158 bits (174), Expect = 1e-33 Identities = 398/600 (66%), Gaps = 5/600 (1%) Strand=Plus/Minus Query 110532 CTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGA 110591 ||| ||||| | |||||| ||||| | || || |||| || |||||||| || | Sbjct 416201 CTCGAATTCGTCTCCGTAGACATCGGCGAGTCCAGATGCCTCGTTTGGACAGAATAGTGT 416142 Query 110592 CCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAA 110651 ||||| ||| || |||||||| |||||||||| ||| ||| |||| | || ||| Sbjct 416141 CCAATCGCCATTCTTCTCAACCCGTTTCATGAACAAGTCGGGAGTCCAGAGGGCGAGGAA 416082 Query 110652 AAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCAT 110711 ||| || ||| | | ||||| | ||| || || || || |||||||| || | Sbjct 416081 AAGATCTCGGGCTCTCACTTCTTCTTTACCATGATTTTTACGGAGGTCCAAAAACTCAAA 416022 Query 110712 GATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACGAC--CCGCC 110769 | || |||||||| ||||| ||||| | ||| | | || || | ||||| Sbjct 416021 TACGTCAGAGTGCCAAGGTTCAAGATAAATAGCAAAAGCACCAGGGCGTTTATTGCCGCC 415962 Query 110770 -TGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGA 110828 || | ||||| | || || || ||||| | ||||| ||||| || |||| || Sbjct 415961 CTGATCCACATATCTGGCAGTATTGTTAAAGACACGAAGCATGGGAATGATCCCATTAGA 415902 Query 110829 TTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACC 110888 |||||||| || ||| ||| | | ||||| || ||| | | | || Sbjct 415901 GGAGCCATTTGTTCCTGCAATGTAGGAGCCAGTTGCACGGATTCGGTGAACGTTGAGTCC 415842 Query 110889 AATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGAGTGTACCATAAATACCAT 110947 |||||| || || ||| ||| | ||||| ||| | |||||| |||| || || | Sbjct 415841 AATACCCCCAGCAGTCTTGGAAATCAGAGCACATGTCT-TCAGTGTATCATAGATCCCCT 415783 Query 110948 CAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTC 111007 |||| ||| |||| | |||| || ||||| |||| |||||| || |||| |||| Sbjct 415782 CAATACTATCCTCCTTCATATCAATAAGGAAGCAGGAAGCCATCTGTGGTTGAGGTGTTC 415723 Query 111008 CCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTATG 111067 |||||||||| ||||| || | || || | || | |||||||||| || ||||| Sbjct 415722 CCGCATTGAAAAGTGTGGGAGAAGCGTGGGTAAAAAATTTTTGGGACATCAGGTGGTATG 415663 Query 111068 TGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATAT 111127 | || | || | || | | |||||||||| |||||| ||||| | ||||| Sbjct 415662 TCTCAATCGCTTTATCAATGTCCTCATGATGAATACCAACGGCAACGCGCATAATCATAT 415603 >seq6 Length=1499889 Score = 111 bits (122), Expect = 2e-19 Identities = 299/451 (66%), Gaps = 10/451 (2%) Strand=Plus/Plus Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267 || || || || | ||| || || || || ||||| || | || |||||||| ||||| Sbjct 77887 TAATCGCCAACACGCTTCTCAAAAAAGTTGGTCTTGCCGGCAAGCGAGATGTTATCCATG 77946 Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAGA-TTGGTGGTTGACCAACTTGTTTCAGAAGACG 119326 ||||| || || || ||||||| | || | |||| |||| | || | || Sbjct 77947 AAGTCGAATGGGTTCGTGGAGTTATAATGTTTCTTGTTG-CCAAGAGCTACAAGTAACCG 78005 Query 119327 ATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTACA 119386 |||| || ||||||| |||| | ||||| | || ||||| || | |||| ||| Sbjct 78006 GTCGGCTACGAACTCGATGTATTGGCACATCAACTTGGAGTTCATGCCAAGGAGAGCACA 78065 Query 119387 CGGGAGAGCATCGAGGATGAAGTTCTT-CTCGATCTCCACAGCTTCTTTCACGATGGAGT 119445 || |||||||| | ||| ||||| |||||| ||||| ||||| | | ||| | Sbjct 78066 TGGAAGAGCATCCGTTAAGAA-TTCTTGCTCGATTTCCACGGCTTCAATGATGATTGCTG 78124 Query 119446 GAATAGTTTCTGTCGATGGTTTGTTTCTCAAGAGTTTAAACAACTCTACG---GCAAATT 119502 || || ||||| || || | ||| | | | || | | ||||| | Sbjct 78125 CAACAGCTTCTGGGCTGGGACGGTGGCG---GAGGTGAGAGAAGAGGAGGCAAGCAAAGT 78181 Query 119503 CTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGA 119562 | ||||| || || || |||||||| ||||| || ||| ||| |||||||||| Sbjct 78182 CAGTGTGAAGACCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTAAGGCCAGGCATGA 78241 Query 119563 GTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCA 119622 | || | ||||||| ||| || || | | |||| ||| |||||||| ||||| | Sbjct 78242 GACCACGCTTCTTTAACCAGAAAATAGAAGCAAAAGAACCACTGAAGAAGATACCCTCAA 78301 Query 119623 CACAGGCGAAAGCGAATAGACGCTCAGCAAA 119653 || ||||||||| | ||||||| ||||| Sbjct 78302 CAGCGGCGAAAGCAATAAGACGCTGTGCAAA 78332 >seq2 Length=1931404 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 |||||||||||||||||||||||||||| |||||||||||||| | |||||| || | Sbjct 1804887 ATAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGAGAGTTCGACCCTCTC 1804828 Query 136776 TGGGAACAGCTT 136787 ||||| ||| || Sbjct 1804827 TGGGACCAGTTT 1804816 >seq13 Length=857040 Score = 84.2 bits (92), Expect = 3e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||| ||||||||||||||| |||||||| |||||||||| ||| |||||||| |||| Sbjct 614133 ATAACTCAGTTGGTTAGAGTGTGGTGCTAATAACGCCAAAGTCGAGGGTTCGACCCCCTC 614074 Query 136776 TGGGAACAGCT 136786 ||||| ||||| Sbjct 614073 TGGGACCAGCT 614063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975712874200